Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0640 ATGTCAGAGCGAGGTTCATTTTCTGGCGTCTTGGCCGCGGATGCCTCAAAGGAGAGGAAGAAAGAAGTAGAGAGTAGACGAAAGGGAAAGGTTCCTTTGCTCAAGCTCTTCTCCTTTGCTGACTTGTATGATTGTGTCTTGATGGCTATTGGTTCTGTTGGGGCTTGTGTTCATGGAGCTTCTGTGCCTGTTTTCTTTGTCTTCTTTGGAAAGATTATCAATGTCATAGGCTTGGCTTACCTTTTTCCCAAAGAAGCTTCTCACGAAGTTGCCAAGTATTCTTTGGATTTTGTGTATCTAAGCATAGCAATATTGTTTTCATCCTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGGATGGCATATTTAAGGTCAATGTTGAATCAAGATATAAGTCTTTTTGATACTGAGGCCTCAACTGGAGAGGTCATTTCATCTATCACAACTGACATCATCGTTGTTCAAGATGCACTATCTGAGAAGGTAGGGAACTTCATGCACTATATAAGCCGATTTATAGCGGGATTTACCATTGGTTTTGTGAGAGTGTGGCAGATTAGTTTGGTGACACTTGCCATTGTACCCTTGATTGCGCTTGCTGGAGGTCTTTACGCATACGTGACGATTGGCCTTATTGGAAAAGTTCGAAAATCATACGTGAGGGCCGGTGAAATTGCTGAAGAGGTGATAGGCAACGTGAGAACGGTACAAGCATTTGTAGGAGAAGAAAGAGCCGTGAGATCATACAAAGTGGCTTTGATGAAAACATATAGAAATGGTAGAAACGCGGGTTTAGCAAAGGGTTTGGGACTTGGCTCTATGCATTGTGTCCTTTTCCTATCATGGGCTCTGCTTGTTTGGTTCACTAGCATTGTTGTTCACAAGAATATTGCCAACGGTGGTGAAGCTTTCACTACCATGCTCAATGTAGTGATATCAGGCTTGTCACTTGGGCAGGCAGCACCAGATATTTCTGCATTTATCCGAGCAAAGGCAGCAGCTTATCCAATTTTTGAGATGATAGAAAGGGACACAATGAATAAAATCAGCTCAAAAAGTGGTAAAAAATTAAGCACAATGGAAGGTCATGTCCAATTTATGGATGTTTGCTTTAGCTATCCATCTCGTCCTGACGTAGTTATCTTCAACAATCTTTGTTTGGATATTCCTTCTGGGAAAATTTTAGCCCTTGTAGGAGGAAGTGGTTGTGGAAAGAGCACAGTTATATCTTTGATTGAGCGTTTTTATGAACCACTTTCTGGTCAAATATTATTGGATGGGAACAATATACGAGAACTTGAACTCAAATGGCTTAGACAACAAATTGGACTGGTTAATCAAGAGCCTGCACTTTTTGCTACAAGCATCAAGGAGAACATACTGTATGGAAAAGATGATGCAACACTTGAAGAAATAAATCAAGCTGTGATGCTTTCCGATGCTCAGTCTTTCATTAACAATCTTCCTGATGGATTAGATACTCAGGTTGGTGAGAGAGGGATACAGTTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCCATAGTTAAGAATCCATCAATCCTTTTATTAGATGAAGCAACTAGTTCTTTGGATGCAGAGTCTGAGAAGAGTGTGCAAGAGGCTCTTGATCGTGTTATGGTTGGTAGAACAACTGTGATAGTGGCACATAGACTTTCTACAGTAAGGAATGCCAATACCATTGCTGTTATCGAGAGGGGGAAGGTAGTGGAAATTGGCAATCATGAGGAACTCATTTCCAACCCCAATAGTGTGTATACATCTCTTGCTCAAGTCCAAGAATCAACCTTTTTGCAAGGACACCCTTCTGTGGATCCTTACTTGGGAGGTTCATCAAGGCACTTAGGAGAATCGTCATCCCATGCAACAAGCTTCCGTGGTAGTTTTCGTTCAGATAAAGATTCTACTAGTCATGCTTTTGCTGACGGAGTGGAAAGTGCTAGAAATTTAAGGCATGTCCCAGCAAGAAGACTATTTTCCATGATTGGTCCTGACTGGCTTTATGGAATTTTCGGAACCTTGGGTGCGTTTATTGCGGGAGCTCATATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCGTACTACATGGACTGGGATACAACACGCCATGAAGTAAAAAAAGTTTCTCTCCTCTTCTGTGGGGCAGCTATTTTAAGTGTCATTGCCTATGTCATTGAACACTTTTCCTTTGGAATCATGGGAGAGAGATTAACCCTTCGTGTGAGAGAAACTATGTTTTCTGCTATTTTGAAGAATGAAATAGGTTGGTTCGATGATGCAAGCAACACTAGTTCTATGCTTTCATCACGCTTAGAAACTGATGCAACATTGTTAAAAACTATAGTAGTTGATCGTTCCACAATTCTTTTGCAAAATGTTGGTCTTGTTGTTGCTGCATTTATTATTTCCTTCATGTTGAATTGGAGGATAACGCTTGTTGTCTTGGCCACATACCCTTTGATCATTAGTGGTCACATTAGTGAGGTTTCCTCTTGCTCCATATTTCAACATTACCAACTATCAGAGTGGTACAGTTGTTTGTGTATTAACGACTTTGTGCAAACATTTCAGAAACTATTCATGCAAGGCTTTGGTGGCAACTTGAGCAAAGCATATTTAAAAGCCAACATGTTGGCTGGCGAGGCTGTGAGTAACATACGCACTGTGACTGCATTTTGTGCTGAACAGAAGGTCCTTGATCTTTATGCCGAAGAGCTTGTGGGGCCTTCCCAGCGTTCACTCAAACGGGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATCTTCTCATCTTATGGCCTTGCCTTGTGGTATGGGTCTGTGTTGATGGAGAAGGAGCTTTCTAGCTTTAAATCAATTATGAAGTCATTTATGGTTTTAATCGTAACAGCGTTAGCTATGGGGGAGACTTTGGCACTAGCACCTGACCTTTTGAAAGGAAATCAATTGGTGGCATCAGTTTTTGAAGTGATGGATAGAAAAACAGGAATATTGAGTGATGTTGGAGAAGAGCTAAAGACAGTGGAAGGAAGAATTGAGCTAAAAAGAATTAATTTCAGCTACCCTTCAAGGCCAGATGTGGTTATTTTTAGTGATTTTAATCTGAAAGTGCTTGCAGGAAAGAATATTGCCTTAGTGGGGCATAGTGGTTGTGGTAAAAGTTCAGTCATCTCCCTTATACTTAGATTTTATGATCCAACATCGGGGAAGGTGATGATTGATGGAAAAGACATCAAGAAGCTAAATTTGAAATCCCTCAGGAAACAAATTGGTCTGGTGCAACAAGAACCGACTCTTTTTGCAACATCAATTTATGAAAACATTCTTTATGGAAAGGAAGGAGCCTCAGAAACAGAAGTGATGGAAGCAGCTAAACTTGCCAATGCTCATAATTTTATTAGTGCTCTTCCTGACAGCTACTCCACCAAAGTAGGTGAGAGAGGAGTTCAACTATCTGGTGGCCAAAAACAAAGGGTAGCTATTGCCAGGGCTATTTTGAAAAACCCCAAAATCTTGTTGCTAGACGAAGCCACCAGTGCATTAGATGTGGAGTCAGAGCGTGTAGTACAACAAGCTCTAGACAAATTGATGCAGAATAGAACAACAATTATAGTAGCACATAGGCTATCCACAATAAGAAATGCAGATCAAATAGTTGTTTTAGAGGATGGAAAGATAGCTGAGCGAGGCACTCATTCAAGTCTTGTAGAGAATACAGATGGAGCATACTTCAAATTAGTCAGCCTTCAACAACAACATCTACAAGAACAAACTGAATGA 3849 0.4095 MSERGSFSGVLAADASKERKKEVESRRKGKVPLLKLFSFADLYDCVLMAIGSVGACVHGASVPVFFVFFGKIINVIGLAYLFPKEASHEVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISSITTDIIVVQDALSEKVGNFMHYISRFIAGFTIGFVRVWQISLVTLAIVPLIALAGGLYAYVTIGLIGKVRKSYVRAGEIAEEVIGNVRTVQAFVGEERAVRSYKVALMKTYRNGRNAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKNIANGGEAFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTMNKISSKSGKKLSTMEGHVQFMDVCFSYPSRPDVVIFNNLCLDIPSGKILALVGGSGCGKSTVISLIERFYEPLSGQILLDGNNIRELELKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEEINQAVMLSDAQSFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSSLDAESEKSVQEALDRVMVGRTTVIVAHRLSTVRNANTIAVIERGKVVEIGNHEELISNPNSVYTSLAQVQESTFLQGHPSVDPYLGGSSRHLGESSSHATSFRGSFRSDKDSTSHAFADGVESARNLRHVPARRLFSMIGPDWLYGIFGTLGAFIAGAHMPLFALGISHALVSYYMDWDTTRHEVKKVSLLFCGAAILSVIAYVIEHFSFGIMGERLTLRVRETMFSAILKNEIGWFDDASNTSSMLSSRLETDATLLKTIVVDRSTILLQNVGLVVAAFIISFMLNWRITLVVLATYPLIISGHISEVSSCSIFQHYQLSEWYSCLCINDFVQTFQKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVTAFCAEQKVLDLYAEELVGPSQRSLKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELSSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQLVASVFEVMDRKTGILSDVGEELKTVEGRIELKRINFSYPSRPDVVIFSDFNLKVLAGKNIALVGHSGCGKSSVISLILRFYDPTSGKVMIDGKDIKKLNLKSLRKQIGLVQQEPTLFATSIYENILYGKEGASETEVMEAAKLANAHNFISALPDSYSTKVGERGVQLSGGQKQRVAIARAILKNPKILLLDEATSALDVESERVVQQALDKLMQNRTTIIVAHRLSTIRNADQIVVLEDGKIAERGTHSSLVENTDGAYFKLVSLQQQHLQEQTE* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0640 1282 SUPERFAMILY ABC transporter transmembrane region 673 842 IPR036640 GO:0005524|GO:0016021
Apr3g0640 1282 MobiDBLite consensus disorder prediction 631 652 - -
Apr3g0640 1282 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524
Apr3g0640 1282 Gene3D - 362 611 IPR027417 -
Apr3g0640 1282 SUPERFAMILY ABC transporter transmembrane region 36 342 IPR036640 GO:0005524|GO:0016021
Apr3g0640 1282 Gene3D - 1025 1282 IPR027417 -
Apr3g0640 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1273 IPR027417 -
Apr3g0640 1282 Pfam ABC transporter transmembrane region 687 988 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr3g0640 1282 Pfam ABC transporter transmembrane region 50 321 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr3g0640 1282 CDD ABC_MTABC3_MDL1_MDL2 1035 1273 - -
Apr3g0640 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 676 1020 - -
Apr3g0640 1282 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 24 848 - -
Apr3g0640 1282 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 877 1276 - -
Apr3g0640 1282 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 24 848 IPR039421 -
Apr3g0640 1282 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 877 1276 IPR039421 -
Apr3g0640 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 345 - -
Apr3g0640 1282 SMART AAA_5 399 593 IPR003593 -
Apr3g0640 1282 SMART AAA_5 1062 1248 IPR003593 -
Apr3g0640 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr3g0640 1282 Pfam ABC transporter 391 539 IPR003439 GO:0005524
Apr3g0640 1282 Pfam ABC transporter 1054 1202 IPR003439 GO:0005524
Apr3g0640 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 337 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr3g0640 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 610 IPR027417 -
Apr3g0640 1282 ProSitePatterns ABC transporters family signature. 1174 1188 IPR017871 GO:0005524
Apr3g0640 1282 Gene3D ABC transporter type 1, transmembrane domain 35 855 IPR036640 GO:0005524|GO:0016021
Apr3g0640 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1035 1271 IPR003439 GO:0005524
Apr3g0640 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 608 IPR003439 GO:0005524
Apr3g0640 1282 SUPERFAMILY ABC transporter transmembrane region 873 1016 IPR036640 GO:0005524|GO:0016021
Apr3g0640 1282 CDD ABC_MTABC3_MDL1_MDL2 372 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0640 Apr-Chr3 16162653 16193580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0640 50 637 Calmodulin-binding Proteins AT2G36910 38.423 1.64e-113 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0640 K05658 - gmx:100809752 2124.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0640 3 16162653 16193580 Apr3g0640 3 16162653 16193580 ECH