Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0491 ATGTGGAAGAGAGGCATGGTCGCCGCCGTCGGTGCACTCCGGCGGCCATTTACGTCGGGAGTTCGCGACGCCACCATCATCTCCTCCGCCATGAACTCCATGCTTTTCCACTCCCTTAAGGATAACTATATGGAAGTGGCCAAAATGGACATGCCTCATAAAGTGAGTCCTCCGTCGCTAATAACGATCGACGAAGCTGCTTCGATCGCTATCGATAATCGTGTTCCAGCTACCGTCATAACTGGTTTTCTTGGCTCTGGAAAGACTACTCTCCTTAATCATATTCTGACATCCCAACATGGCAAGCGAATAGCTGTCATTGAAAATGAGTTTGGTGAGGTTGATATTGATGGATCATTGGTTGCTAGTCATTCTTCTGTGAGTGAAGATATTATCATGGTTAACAATGGCTGCCTCTGCTGCACTGTGCGAGGAGATCTAGTTAAAATGCTGTTGGAGCTTGTTAGGAAAAAACGAGACAATTTTGATCATATTGTTATTGAAACCACAGGTCTTGCAAAGCCAGCTCCTGTCATTGAAACATTTTGCAGTGATGAGCTGGTTTCACAGTATGTGAAACTGGATGGAGTTGTGACTCTGGTTGACTGCAAGCATGCCATGAAACATTTAAATGAAGTGAAACCAAGATTTGTGGTTAATGAGGCAGTAGAGCAAGTTGCATATGCTGACCGTATTATTTTGAACAAGATAGATTTGGTTACTGAATCTGAGTTAAATATATTGACTAAGAAAATTAAGCACATCAATGGAATGGCACAAATTAAGCAAGCAAAATTTGGATCTGTTGACATAGACTTTGTTCTGGGTGTGGGAGGATATGATCTTGAGAGGATTGAATCGGAGGTACATGGAGAATGTCCCTCTTCTACAAGCCATCAGGATGATTCTGGACATGAACACAAAGGACATCATCATCACGACCATGTGCATGATTCTGCTGTCTCTAGTTTCAGTATTGTTGCAGAGGGAACTCTTGATCTTGATGAGGTTGACGATTGGCTTGAAAGAGTGATAGAGGAAAAAGGAGAGGACCTTTACAGAATGAAGGGTGTCTTGTCAGTGGATGGTTCTGATCAAAGATATGTGTTTCAGGGGGTGCATTCCACGTTGGATGGAAGTCCAGGAAAAACATGGGAACCTAACGAGAAGAGGATAAACAAACTTGTCTTCATTGGAAGGAATTTGGACGAAACTGCCCTTAGAAAAGGCTTCAAAGGGTGTCTAGTATAG 1251 0.4301 MWKRGMVAAVGALRRPFTSGVRDATIISSAMNSMLFHSLKDNYMEVAKMDMPHKVSPPSLITIDEAASIAIDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVSEDIIMVNNGCLCCTVRGDLVKMLLELVRKKRDNFDHIVIETTGLAKPAPVIETFCSDELVSQYVKLDGVVTLVDCKHAMKHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTESELNILTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDLERIESEVHGECPSSTSHQDDSGHEHKGHHHHDHVHDSAVSSFSIVAEGTLDLDEVDDWLERVIEEKGEDLYRMKGVLSVDGSDQRYVFQGVHSTLDGSPGKTWEPNEKRINKLVFIGRNLDETALRKGFKGCLV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0491 416 PANTHER OSJNBA0083N12.6 PROTEIN 49 416 - -
Apr3g0491 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 281 IPR027417 -
Apr3g0491 416 MobiDBLite consensus disorder prediction 299 315 - -
Apr3g0491 416 PANTHER COBW-RELATED 49 416 - -
Apr3g0491 416 SUPERFAMILY Hypothetical protein YjiA, C-terminal domain 321 415 - -
Apr3g0491 416 MobiDBLite consensus disorder prediction 288 315 - -
Apr3g0491 416 CDD CobW-like 76 278 - -
Apr3g0491 416 Gene3D - 301 415 IPR036627 -
Apr3g0491 416 Pfam Cobalamin synthesis protein cobW C-terminal domain 321 415 IPR011629 -
Apr3g0491 416 SMART CobW_C_3 321 415 IPR011629 -
Apr3g0491 416 Pfam CobW/HypB/UreG, nucleotide-binding domain 76 261 IPR003495 -
Apr3g0491 416 Gene3D - 72 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0491 Apr-Chr3 10191928 10203674 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0491 - - gmx:100788010 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0491 3 10191928 10203674 Apr3g0491 3 10191928 10203674 ECH