Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0479 ATGGGGTGTTTCAATTTCAGTAGTGTTGAGTATGAACCTGTTGATGATGAGTTATCTTCTCCAAGGGAAAACCACAAAAGGAGAGTTTCAGTTCTTCCCTTGATATTTCTCATCTTTTATGAGGTTTCTGGAGGACCCTTTGGTGTTGAGGACACTGTGCATGCAGCAGGTCCTCTGTTAGCCCTTATTGGGTTCCTAGTTTTCCCATTCATTTGGAGTGTTCCTGAGGCTTTGATCACTGCAGAGATGGGTACCATGTTTCCTGAAAACAGTGGTTATGTGGTTTGGGTTTCTTCTGCTTTGGGTCCCTACTGGGGATTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGATAATGCTTTGTACCCAGTTCTTTTTCTTGATTATATGAAATCAGGAATCCCATCATTAGGTTGTGGAGTTCCCAGGGCTGTTTCAATTTGTGGTTTAACTGTGGTTCTCACTTGTTTGAACTATAGGGGTTTAACCATTGTGGGATTTGTTGCAGTTCTTTTAGGTGTTTTCTCTCTCCTTCCTTTTGTGGTCATGGGACTATTGTCAATTCCAAACTTGAAACCTTCCAGATGGTGTGTGACAAATGTAGATGATGTTGATTGGAATCTGTATTTGAACACTCTATTTTGGAACCTTAATTATTGGGACTCTATTAGTACTCTTGCTGGAGAAGTTGAAAATCCAAAGAAAACTCTTCCCAAGGCTTTATTTTATGCTTTGATACTTGTAGTTCTAGGCTATTTCCTCCCTCTTCTAATTGGCACTGGTGCTGTTCCCCTTAATAGAGAGTTGTGGACTGATGGGTACTTCTCAGATATTGCTGAGATTGTTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGTTGCTGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGTAGTGACTCATTCCAGCTTCTAGGGATGGCTGAGAGAGGAATGCTACCTGAGTTTTTTGGCAAGAGATCTCGTTATGGTACCCCTCTTATAGGAATACTCTTTTCAGCCTCTGGTGTAGTCTTACTTTCATGGCTGAGCTTTCAGGAAATTGTGGCTGCAGAAAATTTCTTGTACTGTTTTGGAATGATTTTGGAGTTTGTTGCATTTATATTGTTGAGGATCAAACTCCCCAATGCTTCAAGGCCTTATAAGATACCAGGGGGAATAGCTGGTGCAATTGCTATTTGCATTCCTCCCGCACTTTTGATTTGTGTGGTGCTGGCATTCTCTTCCTTGAAAGTCATGGTGATAGGCCTTGTTGCTGTGGTGATTGGCCTTGTAATGCAACCTTGTCTTAAATTTTTGGAGGAAAAGAGATTGTTGAAGTTCTCAGTTAGTTCTGAGCTTCAAGAAGTTCACAATGAGGAGAGCGTTCACCCTTTGGTGCATTAG 1422 0.4177 MGCFNFSSVEYEPVDDELSSPRENHKRRVSVLPLIFLIFYEVSGGPFGVEDTVHAAGPLLALIGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYMKSGIPSLGCGVPRAVSICGLTVVLTCLNYRGLTIVGFVAVLLGVFSLLPFVVMGLLSIPNLKPSRWCVTNVDDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKALFYALILVVLGYFLPLLIGTGAVPLNRELWTDGYFSDIAEIVGGVWLRWWLQVAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFGKRSRYGTPLIGILFSASGVVLLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIKLPNASRPYKIPGGIAGAIAICIPPALLICVVLAFSSLKVMVIGLVAVVIGLVMQPCLKFLEEKRLLKFSVSSELQEVHNEESVHPLVH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0479 473 PANTHER POLYAMINE TRANSPORTER PUT1 5 466 - -
Apr3g0479 473 PIRSF AA_transporter 10 466 - -
Apr3g0479 473 Gene3D Amino acid/polyamine transporter I 23 455 - -
Apr3g0479 473 Pfam Amino acid permease 33 429 IPR002293 GO:0016020|GO:0022857|GO:0055085
Apr3g0479 473 PANTHER POLYAMINE TRANSPORTER PUT1 5 466 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0479 Apr-Chr3 9921876 9923297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0479 1 465 Organic Solute Cotransporters AT1G31830 71.855 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0479 - - gmx:100810822 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0479 3 9921876 9923297 Apr3g0479 3 9921876 9923297 ECH