Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0467 ATGTCGCTGATGAGAAAAAGGCTAACTTGCTGCACAGTAAAGGAAGCCAAAATTAGCATTGATTTTGACGAGCAACATAGGGTTATGACATTTAATGGCCTCGAGAGTTGCATGCATGATAATCAATCTTATGAAGATGATAGCAGAACTAGTAGAGGAGATGGGTGTATAACTGATTCATTTAATGATGATGACTCTAGCTTTTCATCCAGTAAAGATGCTTTTGGATCATTTTCTTCAAAATGTTTGACTATGAAAAGAGATGAGCATGGATTGGAAGAGTGGGAACTCTCAGAAACTCCGCAACATTTTTATGTTAAAGAGAAGTCTGCGTATGACATACAATATTCAGATGTAGAAGCCATGAAAGAAAAGTTTGCAAAGCTGTTGCTAGGTGATGACGTTACAGGAGGAACTAAAGGCCTCAATACAGCTTTAGCGCTGTCTAATGCCATCACAAATCTAGCAGTGACAGTTTTTGGTGAGTTGTGGAAATTGGAACCGCTATCTGAAGAAAGGAAGAGCAAATGGCGACGAGAAATGGACTGGTTACTGTCTCCTACCAACTATATGGTTGAGTTAGTTCCTGCAAAGCAAAACGGTGCAAATGGTGGGATATTTGAGATAATGACCCCAAAAGCTCGTAGAGACGTCCAAATGAATCTTCCAGCACTTGAGAAGTTGGACACTATGCTTATTGAAACACTAGACTCAATGGTGCATACTGAGTTTTGGTATGCAGAGGAAGGAAGCCGGTCAGAGAGGAGGAACATAAGTGGAAGACAAAGCAAAAGATGGTGGCTTCCTTCGCCACAAGTACCAAGAACCGGGCTTTCTGACACTGAAAGGAAGAGGCTGCTTCATCAGGGAAGGGTAGTACATCAAGTATTCAAGGCTGCCAGATCTATCAATGATACTATGTTGCTTGAAATGCCCGTGCCAATAATAATTAAGGACGCACTTCTGAAGTCTGGAAAGACAAGCCTTGGAGAGGAACTACACAAGGTCTTAATGGCTGAATCGAGTTCTGGAGAAGAAATGCTTGAAGCTCTCAATTTGAAATCTGAACATAGTGCCCTAGAGATTATTAATAGATTGGAAGCTGCTACATTTTCATGGAAAGAGAGAATTGTGCAAGAAAATAGTAACAAATCCCCTGTTCGAACCTCATGGTCTTTCATGAAGGACCCTATGTCAGGCATGGATAAGATGGAACTATGTTTGGACCGTGCAGACACACTTATAAAGCTACTTAAAACCAGATATCCAAACCTTCCTCAAACATTTCTAGATGCTGCGAAGGTTCAATATGGCAAGGATATTGGGCACTCCATTTTGGAAGCATACTCCAGAGTTCTTGGAAGTTTAGCCTTCAGCATACTGTCTAGAATAGGAGATATATTGCAGGAGGATGCTTTAAGCAATCCCAACTCACCTATTTCAACAAGTTGCTCTCCTGGGATAAATCTTTCTGAAGCTTGGGTGGCTGGTTCACATATTAGGCACTCATTAATTGATAAGATGAACAAGGCAGATGAAAACCATTGTGATTCTAGTTGTTTAAGTACTTCTGATATGGAACTCTCATCGACTGAGGCCAAATCTAGCTCTGTAATTGCCACCCCAAGCCGTGGTCGCTTGTGGTGCATTGGTAGAGAGGCATGTAAAAGTGCGTCTCCTCAAAATTCCCCATAG 1695 0.4147 MSLMRKRLTCCTVKEAKISIDFDEQHRVMTFNGLESCMHDNQSYEDDSRTSRGDGCITDSFNDDDSSFSSSKDAFGSFSSKCLTMKRDEHGLEEWELSETPQHFYVKEKSAYDIQYSDVEAMKEKFAKLLLGDDVTGGTKGLNTALALSNAITNLAVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNGANGGIFEIMTPKARRDVQMNLPALEKLDTMLIETLDSMVHTEFWYAEEGSRSERRNISGRQSKRWWLPSPQVPRTGLSDTERKRLLHQGRVVHQVFKAARSINDTMLLEMPVPIIIKDALLKSGKTSLGEELHKVLMAESSSGEEMLEALNLKSEHSALEIINRLEAATFSWKERIVQENSNKSPVRTSWSFMKDPMSGMDKMELCLDRADTLIKLLKTRYPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGSLAFSILSRIGDILQEDALSNPNSPISTSCSPGINLSEAWVAGSHIRHSLIDKMNKADENHCDSSCLSTSDMELSSTEAKSSSVIATPSRGRLWCIGREACKSASPQNSP* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0467 564 ProSiteProfiles PRONE domain profile. 109 481 IPR005512 GO:0005085
Apr3g0467 564 Gene3D PRONE domain, subdomain 1 110 348 - -
Apr3g0467 564 Gene3D PRONE domain, subdomain 1 349 480 - -
Apr3g0467 564 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 117 475 IPR005512 GO:0005085
Apr3g0467 564 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 21 555 - -
Apr3g0467 564 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 21 555 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0467 Apr-Chr3 9717384 9723052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0467 - - aprc:113860057 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0467 3 9717384 9723052 Apr3g0467 3 9717384 9723052 ECH