Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0466 ATGGCCACCACTATGCCTAAATTGAAGAGAAAATTTGCATTGGGTACACATGGCGGCACCCGCCCATTAGTGTGGCTAGTAGCCATTATATGCACCATCTTAGCCGTAGCCGTGATTGTTGCTGGCATTGTAGTGTTCATTGGTTACATAGTGATCCACCCAAGGATGCCCATCATCAGTGTCACTAATGCTCATCTTGACTTTCTGAAAAATGATTATGCTGGTCTTTTCCAAATCCAACTCAACATTGTTGTGACTGCAAAGAATGGGAATGCCAAGGCTCATGCAACCTTTTCTAAAATTACCTTCAACCTTAGCTACCAAGGCCAAGACTTAGCCGTGTTGGTTGCAGACCCATTTGAGGTGCCCAAAAACAGTTCGAAGGACCTCAACTATTTTATTCAATCATCTTCTATACCATTAAATCCAGATCAAATGGAGGAAGTGGATGATGCATGGAAACGAAATGAGATTGAGTTTAATTTCAAAGGAGGTGCGAGGACTCAGTGGAGGGTAGGGCCTTTGGGCTCTGTTAAGTTCTTGTGTCGTCTGAATTGTGACCTCAAGTTCCGCCCCTTGAATGGGACTTACATACCCTCGAGGTGCACCTCCAAATCAAAATGA 624 0.4407 MATTMPKLKRKFALGTHGGTRPLVWLVAIICTILAVAVIVAGIVVFIGYIVIHPRMPIISVTNAHLDFLKNDYAGLFQIQLNIVVTAKNGNAKAHATFSKITFNLSYQGQDLAVLVADPFEVPKNSSKDLNYFIQSSSIPLNPDQMEEVDDAWKRNEIEFNFKGGARTQWRVGPLGSVKFLCRLNCDLKFRPLNGTYIPSRCTSKSK* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0466 207 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 207 - -
Apr3g0466 207 Pfam Late embryogenesis abundant protein 85 169 IPR004864 -
Apr3g0466 207 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 15 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0466 Apr-Chr3 9699157 9703466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0466 - - gmx:100797168 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0466 3 9699157 9703466 Apr3g0466 3 9699157 9703466 ECH