Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0461 ATGGAACAACCTCCTAGATGCCAATTCACAGTGATTTTCTTCATCATCATTTCCCTCTCCCTTGGCTTAATTTCCTTTATCTTGTGTGTAGCCGCTGAGATGAAGAGGAATAAGGAGGAGGACATAAGATGGAATGGGAAACTATGTTATTTGCCATCAAGCAAGGCATTTGGATTGGGTATTGCAGCTTTGGTTAGTTTTTTTCTTGCCCAGATCATTGGGAATTTTATATTGTTAAAATATTCTTGCTCGAGAGGAAAGAGTAAATCCCAGTATAAGATGCCTCCTATTGCAAAGGTTCTGCTTTTGATATCTTGGGTTAGCTTTGGAATTGCGACCATTTTATTGGTTGTAGCGACAAGCATGAACAGAAGGCAGGCATATAGGGTAGGATGGTTGAATGGGGAGTGCTACATAGTCAAAGGAGGAACTTACGCTGGCTCAGCCATTTTGGTACTCGTTGCAGTGGGTTCTGGAAATGGTTCAGCTTTCTCTACAATAAAATCCACCCAACCAAATAAGGATAAGAAAATACACAAACAAATCGGGGTGATATTATAG 561 0.4046 MEQPPRCQFTVIFFIIISLSLGLISFILCVAAEMKRNKEEDIRWNGKLCYLPSSKAFGLGIAALVSFFLAQIIGNFILLKYSCSRGKSKSQYKMPPIAKVLLLISWVSFGIATILLVVATSMNRRQAYRVGWLNGECYIVKGGTYAGSAILVLVAVGSGNGSAFSTIKSTQPNKDKKIHKQIGVIL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0461 186 Pfam Protein of unknown function (DUF1218) 63 156 IPR009606 -
Apr3g0461 186 PANTHER OS07G0462200 PROTEIN-RELATED 5 167 - -
Apr3g0461 186 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 5 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0461 Apr-Chr3 9552529 9554111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0461 - - gmx:100500694 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0461 3 9552529 9554111 Apr3g0461 3 9552529 9554111 ECH