Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0460 ATGGAGCAACTGAAGACGATAGGGCGTGAACTCGCCATGGGATCCCAAGGAGGCTTCGGTCAATCAAAAGAGTTTCTCGAACTCGTCAAATCCATCGGGGAAGCCCGATCCAAGGCCGAAGAGGACCGCATCGTGCTCCGTGAAATTGAAACCCTCAAACGACGCATCGTCGAACCCGACATCCCAAAACGGAAGATGAAGGAGTACATCATCCGCCTTCTGTACGTTGAGATGCTCGGCCACGACGCATCATTTGGTTACATCCACGCCGTCAAAATGACCCACCACGACAACCTCCTCTCGAAACGCACCGGTTACTTAGCCCTCACTCTCTTCCTCAATGAAGACCACGACCTCATCATCCTCATCGTCAACACCATCCAAAAAGACCTCAAATCTGATAACTACCTCGTCGTTTGTGCCGCTCTTAATGCCGTTTGCAAGCTCATTAACGAGGAAACCATCCCCGCCGTGCTCCCTTCAGTCATCGACCTTCTCTCCCACCCCAAAGACGCCGTTAGGAAAAAAGCCGTTATGGCTCTCTATCGCTTCCACCACAAATCCCCTTCCTCCGTTTCCCATTTACTCTCCAATTTCCGCAAACGGTTGTGTGATAACGACGCTGGCGTCATGGGTGCCACTCTGTACCCTCTCTTTGACCTCATAAACGTTGACCCTAACGCTTATAAGGACCTCGCAGTTAGCTTCGTTAGCATTCTCAAACAGGTCGCCGAACACAGGTTGCCTAAGAGCTATGACTATCACCAGATGCCAGCGCCGTTCATTCAGATTAAGTTGCTCAAAATACTCGCCTTATTGGGGAGTGGTGACAAGCATTCGAGCGAACATATGTATACTGTTATTGGCGATATAATTAGGAAGGGCGATTCGTCTAGTAATATAGGGAATGCTATTCTTTATGAGTGCATATGCTGTGTCTCTTCGATATATCCAAGTGCTAAGTTGTTGGAAGCCGCTGCGGACGTCATTGCGAGGTTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGACGCCCTTGGTCGGCTCATTAAGACAAGTCCGCATATTGCAGAACAGCATCAACTGGCCGTCATTGACTGCTTAGAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAGGTTGCACATAATTTAATGCGATTGATTGGTGAAGGATTTGGAGAGGACGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCGGTTGAGTCATATTTGCGCATCATTGGGGAGCCAAAGCTTCCATCAGTGTTTCTTCAAGTAATATGTTGGGTTCTGGGGGAATATGGCACAGCTGATGGAAAGTATTCTGCTTCATATGTCACTGGGAAGTTATGTGACATTGCAGAGGCATATTCAAATGATGAAACTGTTAAGGCATATGCGATTTCAGCATTGACAAAAATTTATGCATTTGAAATAGCAGCTGGGAGGAAAGTAGATATGCTACCTGAGTGTCAATCTTTGGTCGAAGAATTATTAGCATCCCACTCCACTGATTTGCAGCAACGTGCTTATGAATTGCAAGCCCTTATTGGTTTGGATGCACAAGCTGTTGAAACAATAATGCCCCAAGATGCAAGTTGCGAAGACATTGAGGTTGATAAGAATCTTTCTTTTCTAAATAGTTATGTCCAGCAGTCTCTAGAAAGGGGCGCTCTGCCCTATATTCCAGAGGATGAGCGCACTGGAATGGTGAATGTGAGCAACTTCAAAAGCCAGGATCAACATGAATCTGCACAACATGGTCTAAGATTTGAGGCATATGAGCTTCCAAAGCCTCCAATGCCATCAAAAGTTGCTTCAGTTTCACTTTCATCCTCAACAGACCTTGTTCCTGTATCTGAGGCATTGTATTCTCGGGAGACTCACCAGATCTCATCAGTGGGATCATCTTCAGACACAGGATCTTCAGAGCTTAAGCTAAAGCTTGATGGCGTTCAAAAGAAATGGGGTAGGCCAACTTATTCATCTCCGACATCTTCCTCAAATTATACTTCCCAAAACCCTGTGAATGGGGTGACTCAAGTGGATGTTACAACTTCTGTAAATTCAAAAGCACGTGATAACTATGATTCAAGAAAGCAAAAGATTGAAATTCCTCCTGAAAGGCAGAAACTTGCTGCTTCATTGTTTGGTGGATCAACTAAAGTTGAGAAAAGATCTTCAACCAGCAATAAGGTTCCTAAGGCTGGTGCTAGTCCTGCAGACAGAACTCAAGAATCAAAAGCTGCAGTTGTACCTAGTGAAGTAGCTCAGGAGAAAACTAATCAACAATCTCCTCCTCCAGATTTGCTTGACTTGGGTGAACCAACTGTCACTGCTGTACCTCCCTCTGAGGACCCATTCAAGCAATTGGAAGGGCTTCTTGACCCAAGCACTAGTTCTACTACAAATCATAGTGGTGGTGCTGTTACAAATGCACCGGATATTATGTCACTCTATGCAGATCCTGCTGCAAGTAGACAGAGTAGCAGTGGTGGCTATTCTATCGCTGTGGGTGGGGATAATGCAAATCTTTCATCAGAGTTGTCAAACGCTGCTGACAGAGGTACTACTGGAGAAACGATTGTGACTCCTTTGTCACAATCTGTAAAGGGTCCAAATGCTAAAGATTCTTTGGAAAAGGATGCAAAAGTGAGGCAGATGGGCGTTACACCCTCGAGTCAGAACCCCAACTTGTTCAGCGACTTGCTTGGCTAA 2748 0.4538 MEQLKTIGRELAMGSQGGFGQSKEFLELVKSIGEARSKAEEDRIVLREIETLKRRIVEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHHDNLLSKRTGYLALTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPSVIDLLSHPKDAVRKKAVMALYRFHHKSPSSVSHLLSNFRKRLCDNDAGVMGATLYPLFDLINVDPNAYKDLAVSFVSILKQVAEHRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKHSSEHMYTVIGDIIRKGDSSSNIGNAILYECICCVSSIYPSAKLLEAAADVIARFLKSDSHNLKYMGIDALGRLIKTSPHIAEQHQLAVIDCLETMNKVFEHAGDLVNIKVAHNLMRLIGEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYVTGKLCDIAEAYSNDETVKAYAISALTKIYAFEIAAGRKVDMLPECQSLVEELLASHSTDLQQRAYELQALIGLDAQAVETIMPQDASCEDIEVDKNLSFLNSYVQQSLERGALPYIPEDERTGMVNVSNFKSQDQHESAQHGLRFEAYELPKPPMPSKVASVSLSSSTDLVPVSEALYSRETHQISSVGSSSDTGSSELKLKLDGVQKKWGRPTYSSPTSSSNYTSQNPVNGVTQVDVTTSVNSKARDNYDSRKQKIEIPPERQKLAASLFGGSTKVEKRSSTSNKVPKAGASPADRTQESKAAVVPSEVAQEKTNQQSPPPDLLDLGEPTVTAVPPSEDPFKQLEGLLDPSTSSTTNHSGGAVTNAPDIMSLYADPAASRQSSSGGYSIAVGGDNANLSSELSNAADRGTTGETIVTPLSQSVKGPNAKDSLEKDAKVRQMGVTPSSQNPNLFSDLLG* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0460 915 MobiDBLite consensus disorder prediction 665 783 - -
Apr3g0460 915 MobiDBLite consensus disorder prediction 898 915 - -
Apr3g0460 915 MobiDBLite consensus disorder prediction 668 702 - -
Apr3g0460 915 Pfam Adaptin N terminal region 57 373 IPR002553 GO:0006886|GO:0016192|GO:0030117
Apr3g0460 915 Gene3D - 13 371 IPR011989 -
Apr3g0460 915 Gene3D - 372 540 IPR011989 -
Apr3g0460 915 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 13 372 - -
Apr3g0460 915 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 372 911 - -
Apr3g0460 915 PIRSF AP4_epsilon 804 915 IPR017109 GO:0015031|GO:0030124
Apr3g0460 915 PIRSF AP4_epsilon 371 775 IPR017109 GO:0015031|GO:0030124
Apr3g0460 915 PIRSF AP4_epsilon 11 373 IPR017109 GO:0015031|GO:0030124
Apr3g0460 915 MobiDBLite consensus disorder prediction 854 884 - -
Apr3g0460 915 SUPERFAMILY ARM repeat 22 533 IPR016024 -
Apr3g0460 915 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 372 911 - -
Apr3g0460 915 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 13 372 - -
Apr3g0460 915 MobiDBLite consensus disorder prediction 731 745 - -
Apr3g0460 915 MobiDBLite consensus disorder prediction 703 717 - -
Apr3g0460 915 MobiDBLite consensus disorder prediction 854 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0460 Apr-Chr3 9521313 9539823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0460 K12400 - gmx:100779276 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0460 3 9521313 9539823 Apr3g0460 3 9521313 9539823 ECH