Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0443 ATGGCGTTTATACAACTCTTTGCTGTTGCCTCTTTTCCCGTGATAAAAGTTTTACTGTTGACTGCACTTGGCTTGTTTCTAGCACTGGATAACATATCTATTTTGGGAGAAGATGCAAGAAAAAAAGTGAATCAGCTTGTGTTTTATGTGTTTAATCCATCACTGGTGGGTAGCAATCTGGCCGAAACGATTACTTATGAGAGTGTTGTTTTGTTGTGGTTCATGCCGGTCAATATTCTTTGCACATTCATATTAGGTTCGGCCTTAGGATGGATTGTGATTAAAATCACTAGGCCTCCCAAACACTTGGAAGGTCTAATCTTGGGTTGCTGTTCTGCAGGAAATTTAGGAAACTTGCCTATGATCATTATTCCGGCTATATGCAAGGAGAAAGGTAGTCCTTTTGGAGATTCTGATGTCTGCTATCAATATGGGATGGCTTATGTTTCACTTTCGATGGCGATTGGAGCAGTTTTTCTATGGTCATATGTTTTCAACATAATGCGAATTTCTTCAAGGAGAATCCAAAATGAAGGTAGCAAGTTGAAGGCTTCTGAGGAAATGCCACAGCCAGACAATTTTTCAGAGACTCAAAATCCTGCAAAAGATGCCCTGAATGATGCATATGCCATACTGCTTCCTAAAGAAGAATCAGAGGAACAAGCAAAGATTTCAATCGCAGATAAAATTAAGCACAACTTTAGGATGGTTTCAAGCAACTTCAATTTCAAAGCCATATTTGCACCATCAACCCTTGGAGCAATTGCTGGCTTTATCATTGGTGTAATCCCCCAAATACGCAATTTCGTTATAGGCAGTGATGCTTCGCTTCACGTTGTCGAGGACTCTCTTTCCATGTTGGGTGACGCAGCCATCCCAACCATCACTCTTATTATGGGTGCAAACCTACTCAAAGGTTTGAAAGGAACAAGTACATCATTGTGGACCATTGTGGGAATTATAGCGGTTCGTTATATTTTGTTGCCTCTTTTGGGTGTTTTAGTTGTTAAAGGGGCAATAAAGTTGGGGTTGGTGCAATCAAATCCTCTGTATCAGTTCGTGCTTCTACTTCAATATGCACTTCCACCAGCCATGAATATAGGAACTATGGCTCAGTTGTTTGGATCCGGTGAAAGTGAATGTTCTGTTATCATGTTATGGGCATATGCTTTGGCGTCAATTGCAGTAACCCTATGGTCAACCTACTTCATGTGGCTAGTGTCTTGA 1227 0.4075 MAFIQLFAVASFPVIKVLLLTALGLFLALDNISILGEDARKKVNQLVFYVFNPSLVGSNLAETITYESVVLLWFMPVNILCTFILGSALGWIVIKITRPPKHLEGLILGCCSAGNLGNLPMIIIPAICKEKGSPFGDSDVCYQYGMAYVSLSMAIGAVFLWSYVFNIMRISSRRIQNEGSKLKASEEMPQPDNFSETQNPAKDALNDAYAILLPKEESEEQAKISIADKIKHNFRMVSSNFNFKAIFAPSTLGAIAGFIIGVIPQIRNFVIGSDASLHVVEDSLSMLGDAAIPTITLIMGANLLKGLKGTSTSLWTIVGIIAVRYILLPLLGVLVVKGAIKLGLVQSNPLYQFVLLLQYALPPAMNIGTMAQLFGSGESECSVIMLWAYALASIAVTLWSTYFMWLVS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0443 408 PANTHER - 1 407 IPR045033 GO:0080162
Apr3g0443 408 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 407 - -
Apr3g0443 408 Pfam Membrane transport protein 12 399 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0443 Apr-Chr3 8924862 8931032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0443 K24139 - gmx:100817605 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0443 3 8924862 8931032 Apr3g0443 3 8924862 8931032 ECH
Apr7g0294 7 8300586 8306332 Apr3g0443 3 8924862 8931032 PCT