Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0437 ATGGGAAGGGTTGTGGTAACTGACAAAGAAGAGTTTGGTGACATGGAGAATGGTGATTTCAGTGATTCCCAGTTAATTAGTCACGTCAAAGATGTCCTTGCTGCAGTCACGTTGGGTGATAGAGAGAATTACGATGAACTTGTTGGTTATTTGCACCCGAAAAAGAAACTTAATCCTGATGAGGTTGCTTACCTTGTGACAACTTTGAAGGCACTTTCTGGAGCAGTGTCCTCTATCGATTCTGTTCATCATGAAGCTCTTCTTTTTGCTGTGTCAAGAATGAGCTTGTGGAATTATGGAACTGATGTTATGGATGCGCTGCTGGAGCTCATTGTATCATTGGCTGCTTCCAATGGAAAATATATTGACTGGTGTTTGGAGATGCTTGTGAAGCATTTTGTGCCACCTTATTACCTCTTAGATCTTCTGAAGCAGGAGAATGGAATTGACAGGAAAAATAAAGTTCTGTCACGAGTGCACGCTGCTTTGGAAGAGATAGCTGATTTGGTGCCCCTTGCTCCCTTGCGACTATCTCCAATAGTTGTCCAGAAAATGCCAAGTGTCTTCAGTAAGGAAACTGAGATTGTTATGTATGTGGAGAATATGTTGAGGCTGGAGAGTGGTGCAATTGGAGAAACTGTTGGTTCTACAATGCTGCCTGCACTTGTGGATAGGTTGATAGAGTTGGATGTGGAAATTGGATGGGATGGAATCCTGATGGAAGATGCCAAAGGCATATTTGAAATGGAGTTAGATGATGATACTGAATTTGCAGATGAGGATGAGAAACGTGATAGTATGGCTCCTGCAGAGTTGAAATATAGGAAAAGTTTGCAAGGAAACCTGGTTGTTGAAAAATTGGATAGCCTAATGGTGCTGACTTTTGTGCACCTTGAATCCTGTCAAAGCAGTGGCCGCTTGGCTGGGGTATTCAATGTTCTGCTGACATCATTTCAAAGAACTGTATTAAATGCATACAAGTCAAAATTTACCCAGTTTGTGATGTTCTATGCATGTGCATTGGATCCTGAAGGATGTGGTGTGAAATTTGCCATGATTCTTACAGAGATGTTTGAATGTGATGTTAACCCCCCTATTACCAGAATGAGTGCTGTTGCTTATCTGGCTAGTTATCTGTCTCGTGCAAGGTTTCTTTCAGCTGCATTGGTTGCCAGCATCATACAAAGATTGGTCAGTTGGTGTTTTGACTATTGCAAGTTGCATGATTTTGATATGAATCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGGCCATCATGTATATTCTGTGTTTTCGCATGAGGTCTGTGATGGATACACCAAGGCTTAAATTGCAGCTTCTCAATATGCCCATGGAAGCAATCTGGAAACATAAATTGAGTCCCTTGAAGGTGTGTTTGCCTACTGTAGTGGAAGAGTATCTTAGACAGGCAAAGGCTGCTAAACTTTTCATGGCATCTGAGTCATTTGTTTTCAATGATGTACTCGAGTCTGATCTTTCCAGGGCTTTTGGTGGGATGGATAGACTTGACATGTTCTTCCCATTTGATCCATGTTTATTGAAGAAAAGTGAAAGCTACATAAGGCCATTTTTTGTACGCTGGTCTAAAGTCAGAACTACATACGATAGTGATGACAATGATGAAGTCAGTGACAGTGGCAGCGAAGTATCAGATGATGATTTTATTGACAGGAATGCAAAGGATATGATTGATGATGACATGATGGTGAGCGTAGAAGTAGGTCTTGGTTTTAATCCTGACTTGAACAAAATGTCTATCACACCCAAACAATCTTTAACATACGAGACACAATTGGAACGTTGTACGCGAATGCCAGCAAGAATCAGACCATCCACTAGTCCAGAGTCTTTGTAA 1881 0.4131 MGRVVVTDKEEFGDMENGDFSDSQLISHVKDVLAAVTLGDRENYDELVGYLHPKKKLNPDEVAYLVTTLKALSGAVSSIDSVHHEALLFAVSRMSLWNYGTDVMDALLELIVSLAASNGKYIDWCLEMLVKHFVPPYYLLDLLKQENGIDRKNKVLSRVHAALEEIADLVPLAPLRLSPIVVQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSTMLPALVDRLIELDVEIGWDGILMEDAKGIFEMELDDDTEFADEDEKRDSMAPAELKYRKSLQGNLVVEKLDSLMVLTFVHLESCQSSGRLAGVFNVLLTSFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMILTEMFECDVNPPITRMSAVAYLASYLSRARFLSAALVASIIQRLVSWCFDYCKLHDFDMNPRAHQVFYSGCQAIMYILCFRMRSVMDTPRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVEEYLRQAKAAKLFMASESFVFNDVLESDLSRAFGGMDRLDMFFPFDPCLLKKSESYIRPFFVRWSKVRTTYDSDDNDEVSDSGSEVSDDDFIDRNAKDMIDDDMMVSVEVGLGFNPDLNKMSITPKQSLTYETQLERCTRMPARIRPSTSPESL* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0437 626 Pfam RNA polymerase I specific transcription initiation factor RRN3 19 540 IPR007991 GO:0001181|GO:0006361
Apr3g0437 626 PANTHER TRANSCRIPTION INITIATION FACTOR IA RRN3 14 617 IPR007991 GO:0001181|GO:0006361
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0437 Apr-Chr3 8670845 8678874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0437 K15216 - gmx:100814416 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0437 3 8670845 8678874 Apr3g0437 3 8670845 8678874 ECH