Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0411 ATGATGGAGAGAGCAGATTCTGTACAGAAGCTATACACGCGAATGCGGCTTTGGGAATTTCCGGATCAGTACGTGATTGAACCAACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGCCGAAAAGATGGCTCCATGAAGCTGATTGACGAGATTCCGGAATGCAGCAGTCTTCGAGTTCCTAAGATTTTTACGATATTTGGTGTGGTTGGGATGTTAAAGCTTTTGGCTGGATCGTATTTGCTGGTTATAACCGAGCGTGAATCTGTTGGATCTTATTTGGGGCATCCGATTTTCAAAATTTCATCGATGAAGGTGTTTCCATGTGATTCTTCTCTCAATAATACCACTGCTGAACAGCAGAAGAAGACAGAGATGGAATTTTCTGGGCTGCTAAATGTTGCTGAGAAGACTACTGGTCTGTTCTTCTCATACGACGCTAATTTAACTCTGAGTGCCCAGCGACTAAATGACCTTGGTGATGAGTCTAGGTTGCTTCCCCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAACAATTATATGTTGGAAGTGCTCATAGATAACAAGCTTGACCCATACTTACTCCCTGTAGTCCAAGGCAGCTTTCATTACTTTCAAGCAGCCATTGGGAAAGATATTATTGACATCACTTTGATTGCTAGAAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGGTATGTGGCTAATTTTGTGGAAACAGAACAAATTATGCACTTCAATGGGTACATATCATCATTTGTTCAGGTTCGTGGTTCAATTCCACTGCCCTGGGAGCAAATTGTTGACTTAACATATAAACCAAAGTATGAGTTATTGAAACATGACGAAGCTCCCCGGGTCCTAGAGCGGCATTTCTTAGATTTAAGAAAAAAATATGGGGCTGTGTTAGCTGTTGATCTTGTCAACGGGCATGGAGGAGAGGGCCGACTATGTGAAAAGTTTGGTAGTACAGTACAGCAGGTGGCTAGTAATGATGTCAAATATGTGCACTTCGATTTTCATCACGTCTGTGGGCATGTTCATTTCGATCGTCTCTCAATCCTTTACGATCAAATTTCTGATTTTCTTGAGAGAAATGGATATCTTCTATTGAATGAAAAGGGCGAGAAAATGAAAGAGCAACTTGGGGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGAACAAACGTTACTCAGAGCATGATAGCTCGTAACATATTGGAATACCAGCTTAGAAGGATTGGGGTCTTTGGTGCTGAAGAAACCATTTGTTCTCACCCAAATCTAGATGAGAGGTTTAAGATCTTGTGGGCTAATCATGGGGATGATATCAGTATTCAATATACAGGCACTCCAGCTCTCAAAGGAGATTTTGTTCGATTTGGGCACCGCACAATTCAGGGGATACTGAATGATGGTTGGAATGCTCTTATGCGCTATTATTTGAATAACTTTTCTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTCAACCGAGATATGGCTCCTTCTTCTCAGAATCGAGGCCTTGAAGCTATTGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGGTTCCTTTTTGCAACCATGTCACTGAGGCAAGTTAGATATGATTTTCGGCACTTATTCTTCTCGCTAATGTGGGCAAGCATTAGTGTCGGTATAGCAGCATTTGTGAGGGCCAACGGCCGGCTTTTCTGCAACAGACCTCGGCTACACAAGCCCCGGTGTTGA 1794 0.4281 MMERADSVQKLYTRMRLWEFPDQYVIEPTDGSSGSSLAVSRKDGSMKLIDEIPECSSLRVPKIFTIFGVVGMLKLLAGSYLLVITERESVGSYLGHPIFKISSMKVFPCDSSLNNTTAEQQKKTEMEFSGLLNVAEKTTGLFFSYDANLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLDPYLLPVVQGSFHYFQAAIGKDIIDITLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMHFNGYISSFVQVRGSIPLPWEQIVDLTYKPKYELLKHDEAPRVLERHFLDLRKKYGAVLAVDLVNGHGGEGRLCEKFGSTVQQVASNDVKYVHFDFHHVCGHVHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIARNILEYQLRRIGVFGAEETICSHPNLDERFKILWANHGDDISIQYTGTPALKGDFVRFGHRTIQGILNDGWNALMRYYLNNFSDGTKQDAIDLLQGHYIVSVNRDMAPSSQNRGLEAIASFPLALGLVLTGFLFATMSLRQVRYDFRHLFFSLMWASISVGIAAFVRANGRLFCNRPRLHKPRC* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0411 597 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 596 - -
Apr3g0411 597 ProSiteProfiles Sac phosphatase domain profile. 132 460 IPR002013 GO:0016791
Apr3g0411 597 Pfam SacI homology domain 67 353 IPR002013 GO:0016791
Apr3g0411 597 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 596 IPR030069 GO:0052866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0411 Apr-Chr3 7989940 8005988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0411 10 596 Acyl Lipid Metabolism Gene Families AT5G66020 75.468 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0411 K21797 - gmx:100796999 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0411 3 7989940 8005988 Apr3g0411 3 7989940 8005988 ECH
Apr7g0262 7 7998579 8007452 Apr3g0411 3 7989940 8005988 PCT