Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0406 ATGATCTGTCATCCGTTTCTATTTGCTACAATGAAAAACAGCTTCAAAACCATGCCTTGGACCCGTTCTCTATGGCATTTACGATCAACTCAAATATACTCAGTTCATCATTCACAAAAAATTTGTAACTTTTCCCGTGGTCCTGATCCGGGATCATGGGAATCAATGGAGGATCTACTTCGTTGCTCTGCAAATTTTGTTCCTTTGTCTCCTATCAGTTTTCTAGAGAGAGCAGCAAAGGTTTGCAGTGACAGAACCTCGCTTGTGTATGGTTCTCTGAAGTATAGTTGGACTGAAACCCATCAACGGTGTCTGAAACTTGCTTCTTCTTTGACCCAGTTGGGAATTTCCCGCGGGGATGTGGTTGCCACCCTATCACCTAATGTCCCTGCAATGTATGAGCTGCATTTTGCAGTCCCAATGGCTGGGGCCGTTCTTTGTACACTTAATTCACGCCTAGATGAAGCTATGGTTTCTGTCCTACTGGAGCATTCACAAGCAAAAGTCCTCTTTGTAGACTACCAACTACTTGAAATTGCCCGGGGAGCGCTGAATCAGCTAGCAAAAAAAACAAAGGAATTGCCAATTTTAGTTGTGGTTACTGATTCTGATTGCCCATCTACCATTGACATTGCTTCAATTAGTTATGAGTATGAGAAGCTACTGGCTGTTGGGCATAAAGATTTTGACATAGTGAGACCCCATAGTGAATGGGATCCTATAAGTATAAATTACACTTCAGGCACCACATCTAGGCCTAAAGGAGTTGTCTACAGTCACAGGGGTGCTTATCTGAATTCTCTAGCAACAGTTCTACTTTTTCGAATGGACCTTTTCCCTGTCTATCTATGGAATGTTCCATTGTTCCATTGCAACGGGTGGTGCCTCCCTTGGGGAGTGGCAGCTCAATTTGGGGTCAATGTTTGTCTCAGGAAGGTCTCTCCAAAGAACATATTTGACAATATAACTCAGCATAAGGTGACACACATGGGAGGAGCACCTACTGTGCTGAACATGATTGTGAACTCTAAATTGACTGATAGAAAGCCACTCAATCACAAGGTGGTAGTGATGACAGGAGGTTCTCCTCCACCACCACAGATTCTTGCCAAGATGGAGGAAATTGGCTTTAGCATTTCTCACCTGTATGGCCTCACAGAAACATATGGTCCTGGTACTTTTTGTGCATGGAGACCTGAGTGGGACTTGTTGCCTCAGGAAGAAAGATCAAAGATGAAAGCCAGGCAAGGGGTGCCCCATGTGGGATTGGAGGAAATTGATGTGAAAGATCCTGTCACAATGGAAAGTGTTCCATCTGATGGCAACACTATTGGTGAGGTAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTAAGAGATTTGAAAGCAACGGAAGAAGCTTTCAAAGATGGGTGGTTTCATAGTGGAGATTTAGCTGTGAAACACACTGATGGTTACATAGAAATCAAGGACAGATTGAAGGACATAATAGTCTCTGGAGGAGAGAATATCAGCTCAGTTGAGGTGGAAACAGTTTTGTATAACCATCCAGCAGTTCTTGAAGCCGCGATTGTTGCCAGGCCTGATGATCATTGGGGACAAACTCCTTGTGCCTTTGTGAAGTTGAAAGAAGGGTTTGATGCTGATGCTCAAGAAATAATCAATTTCTGCAGGGACCATATGCCCCATTACATGGCTCCTAAGACAGTCATTTTTCAAGATATGCCAAAAACTTCAACCGGGAAGATACAGAAGTATGTTCTGAGGGAGAAAGCCAAGGCCTTGGGCAGCATCGCTGAAGCCAAGGGTGTAATAAATTGTGGCTGA 1830 0.4361 MICHPFLFATMKNSFKTMPWTRSLWHLRSTQIYSVHHSQKICNFSRGPDPGSWESMEDLLRCSANFVPLSPISFLERAAKVCSDRTSLVYGSLKYSWTETHQRCLKLASSLTQLGISRGDVVATLSPNVPAMYELHFAVPMAGAVLCTLNSRLDEAMVSVLLEHSQAKVLFVDYQLLEIARGALNQLAKKTKELPILVVVTDSDCPSTIDIASISYEYEKLLAVGHKDFDIVRPHSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFRMDLFPVYLWNVPLFHCNGWCLPWGVAAQFGVNVCLRKVSPKNIFDNITQHKVTHMGGAPTVLNMIVNSKLTDRKPLNHKVVVMTGGSPPPPQILAKMEEIGFSISHLYGLTETYGPGTFCAWRPEWDLLPQEERSKMKARQGVPHVGLEEIDVKDPVTMESVPSDGNTIGEVMFRGNTVMSGYLRDLKATEEAFKDGWFHSGDLAVKHTDGYIEIKDRLKDIIVSGGENISSVEVETVLYNHPAVLEAAIVARPDDHWGQTPCAFVKLKEGFDADAQEIINFCRDHMPHYMAPKTVIFQDMPKTSTGKIQKYVLREKAKALGSIAEAKGVINCG* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0406 609 Gene3D - 495 597 IPR045851 -
Apr3g0406 609 Gene3D - 59 494 IPR042099 -
Apr3g0406 609 CDD ttLC_FACS_AEE21_like 66 591 - -
Apr3g0406 609 Pfam AMP-binding enzyme 76 500 IPR000873 -
Apr3g0406 609 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 35 599 - -
Apr3g0406 609 ProSitePatterns Putative AMP-binding domain signature. 243 254 IPR020845 -
Apr3g0406 609 PANTHER ACYL-ACTIVATING ENZYME 35 599 - -
Apr3g0406 609 Pfam AMP-binding enzyme C-terminal domain 509 583 IPR025110 -
Apr3g0406 609 SUPERFAMILY Acetyl-CoA synthetase-like 54 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0406 Apr-Chr3 7892109 7897462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0406 132 601 Miscellaneous Gene Families AT1G20560 63.983 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0406 - - gmx:100500429 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0406 3 7892109 7897462 Apr3g0406 3 7892109 7897462 ECH