Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0405 ATGCCTGAATCAGTTTCGAGCACAAAAGGGAGAACTGGAACAAGGTCATGGCTTTTAACACCCTTATTTGTCATCGTTCTCCCGGTGGCTGTGGCTGCGCTTCTATTCCAGATCGAACCGTTTGAACCGGTTCTGTTGCCGGTCCAGCTGAGCCGGTCCAACTTGGCGGTCCCTTCACGTAACGACCACATGCGACGAGGATCTGAAACTGTGGCAGAGGGATACGTGGCAGGACCCGAAGACATAGCCTACGACGCCGACGCGGGTGTCTTTTACACTGGCTGTGAGGACGGGTGGATCAAGCGAGTTACGGTGAATGACTCAGTCGTTGACTCGGTGGTTGAAAATTGGGTGAACACTGGTGGAAGGCCACTTGGACTTGTTTTGAACCAGAACGGCGAACTCATAATTGGTGACGCCGAAAAGGGACTGCTAAGAGTGACAAGTGAAAAGGAGGTTGAGGTGTTGGTGAATGAGTTTGAGGGCTTAAAATTCAAATTAACAGATGGCGTTGATATAGCAGATGATGGTACTATTTATTTCACGGATGCTTCACACAAATACTCACTAAAGGATGCTGTCTTAGACATCTTGGAAGGGAAGCCTAATGGCAGATTCTTTAGCTATAATCCGTCAACAAAGAAGACAACCCTGCTAGCTCAAGACCTCTACTTTGCCAATGGTGTTGCAGTCTCAGCAGATCAACATTTTGTGGTCTTCTGTGAATCTGTCCTGTTGAGGTGCAATAAATATTACATAAAGGGCCCTAAAAAAGGAACAATAGACAAGTTTTGTGACCTACCTGGCATGCCTGATAACATTCATTATGATGGACAAGGGCAGTATTGGATTGCAATAGTCACGGCCTATACTCCTGAATTGGATTTAGCATTTAGATACCCTTTCATAAGGAAGGCAGTAGCAATCATAACAAAGTATGTATGGAATCTACCTATATCGAAGGCTGGGGGAGTTCTGGCCGTGGATTTAGACGGAAAACCAACAGCACATTATTATGATCCCAAATTATCATTGACCAGTGGGATTAAAATTGGGAACCATATATATTGCGGTTCCATTTTCTACCCCTTTGTCATGCGTCTAAATATTAAGCAGTATCCTGCTCTCCCCACAGTTTGA 1140 0.4526 MPESVSSTKGRTGTRSWLLTPLFVIVLPVAVAALLFQIEPFEPVLLPVQLSRSNLAVPSRNDHMRRGSETVAEGYVAGPEDIAYDADAGVFYTGCEDGWIKRVTVNDSVVDSVVENWVNTGGRPLGLVLNQNGELIIGDAEKGLLRVTSEKEVEVLVNEFEGLKFKLTDGVDIADDGTIYFTDASHKYSLKDAVLDILEGKPNGRFFSYNPSTKKTTLLAQDLYFANGVAVSADQHFVVFCESVLLRCNKYYIKGPKKGTIDKFCDLPGMPDNIHYDGQGQYWIAIVTAYTPELDLAFRYPFIRKAVAIITKYVWNLPISKAGGVLAVDLDGKPTAHYYDPKLSLTSGIKIGNHIYCGSIFYPFVMRLNIKQYPALPTV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0405 379 Gene3D - 64 321 IPR011042 -
Apr3g0405 379 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 18 370 - -
Apr3g0405 379 Pfam Strictosidine synthase 169 256 IPR018119 GO:0009058|GO:0016844
Apr3g0405 379 PANTHER STRICTOSIDINE SYNTHASE-RELATED 18 370 - -
Apr3g0405 379 SUPERFAMILY Calcium-dependent phosphotriesterase 68 370 - -
Apr3g0405 379 Pfam Strictosidine synthase-like, N-terminal 67 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0405 Apr-Chr3 7888017 7892002 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0405 - - gmx:100778397 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0405 3 7888017 7892002 Apr3g0405 3 7888017 7892002 ECH