Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0370 ATGGCAAAGCGAAACTACGTCGTCATTCTGTCGTCAGAAGATGAAGATGATTCTATTGTTCGTTCACTGAGTTCGAGGCGCAACCATACCAAGGCCAAGTCGAGGTCGCGTTCTACATCCTCGCGTGGAAAAAAGAGAGCGCGCGTTTCGGGTTCTCAGCCTCGAAACTCTAAACTGCGCGAGATAGACTTATTTGGAGACGACTTCAATGAAGTGTTTACTGGGTCAAAGGTATCCGCTGGTACTCTAAGGAACTATGCAGAGGAGCTATGGGTTGATAAATACAGACCCCTTTTGCTGGAAGAACTTGCCGTTCACAAGAAAAAGGTTGAAGAAGTTAAGACGTGGTTTGAGGAGAGGCTGAAACCTTCAAAGGCAGCTGTAAATGTAATTGCATCTCATGTGGGAGCGATAGTGTGCGGATGGAACACACCTACACCTGTAATTTGGCAAGAACATCTTTATAATTCTGGCTCAGGGACACAATACACATCCAAGTTGGATGAATTTGAGAATTTTGTTGAGAGAGTACGGAAATATGGATTACTGCCAACTTTTTCTGGGGAGTCAAAGCCTTCCATCATACTTTTAATAGATGACCTTCCCATGAGTAATGGGAAAGCTGCTTTTGGAAGACTTAAGGATTGCTTGCACCTTTTGGTGAACTCAATTCAGATACCCACAGCAATATTGGTCACGGACTATGGCAATGTTGATTCAGCAGATTATAATGCCCGTTGCCTGGAAGAACTTAAGCTATCTCTAGAGAGTTCTGGGGCTTGTAAGGTTGCATTTAATCCAATTACAATGAATACTATGAAGAAGGTGCTTTTTAAAATATGCCAGATGGAGCAGCGTGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAATCAAGTGGGGGTGACATCCGACATGCAATTACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTACTGCATTCTTTGGCCCAGTCTACTTATTCTCCCCGTGCATTCAAAGAGGAAAGCATTGAACCTGTCAGATCAGATGATGGATATTCCTTGCACTTTGGCAGAGATGAGACACTCTCTCTATTTCATGCTTTGGGGAAATTTTTGCACAATAAAAGGGAGACTGGAGTTGCAACACATTATGAACAAGACGGATTTCCTATACAAGAAAGATTTTCAAGGTTACCATTAAAAATGGATGTCCCTGAGAAGATTCTTTGTCAAGCCCATGTGCAACCTGGTGCAGTTGCTGATTTTCTGCATGAAAATGTTCTGGATTTTTTGAATGATGAGGCAATAGATGATGCATGGACTTTATCTTCATATCTAGGTGATGCTGATATTCTTCTTGCTAAACTTCGGGGAATGCTGTGTAGTTATAACGAGGCAGAGAGTGTTTTACAGTCAGCTGCTGCATCCATAGCTGTTCGGGGGGTGCTATTTGGAAATTCTCATCCGCTATCCTCCAGGTGGCATGCAATTCGGCGACCAAAGCTCTGGCAGATTGAGAAGGTATCAATATACAAGAATGAGATAGATAGGCTAAGAATCCCTGCCTCTAAACGGTTGAGTTCTTACCATATGTCAATTATAGCCACAGAGTACATGCCTATGCTTAAATTGTTTGGTAAGAGGGCTTATGATGGTGGATATCATGAACCAAGTCCGGAATCATCACTCAACTTGGAAATGGAAGATTTTAATTTTGACAAAATAAGTTTAGATGAAGAAGGTAGGGAGACTTCTGATGATGACATAGAAGATTGGTAG 1767 0.4194 MAKRNYVVILSSEDEDDSIVRSLSSRRNHTKAKSRSRSTSSRGKKRARVSGSQPRNSKLREIDLFGDDFNEVFTGSKVSAGTLRNYAEELWVDKYRPLLLEELAVHKKKVEEVKTWFEERLKPSKAAVNVIASHVGAIVCGWNTPTPVIWQEHLYNSGSGTQYTSKLDEFENFVERVRKYGLLPTFSGESKPSIILLIDDLPMSNGKAAFGRLKDCLHLLVNSIQIPTAILVTDYGNVDSADYNARCLEELKLSLESSGACKVAFNPITMNTMKKVLFKICQMEQRDVTAEYVDLIAKSSGGDIRHAITSLQFFCLKPNLLHSLAQSTYSPRAFKEESIEPVRSDDGYSLHFGRDETLSLFHALGKFLHNKRETGVATHYEQDGFPIQERFSRLPLKMDVPEKILCQAHVQPGAVADFLHENVLDFLNDEAIDDAWTLSSYLGDADILLAKLRGMLCSYNEAESVLQSAAASIAVRGVLFGNSHPLSSRWHAIRRPKLWQIEKVSIYKNEIDRLRIPASKRLSSYHMSIIATEYMPMLKLFGKRAYDGGYHEPSPESSLNLEMEDFNFDKISLDEEGRETSDDDIEDW* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0370 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 316 IPR027417 -
Apr3g0370 588 Gene3D - 269 331 - -
Apr3g0370 588 CDD HLD_clamp_RFC 268 313 - -
Apr3g0370 588 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 588 - -
Apr3g0370 588 Pfam Rad17 P-loop domain 87 126 - -
Apr3g0370 588 MobiDBLite consensus disorder prediction 20 55 - -
Apr3g0370 588 MobiDBLite consensus disorder prediction 26 51 - -
Apr3g0370 588 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 588 IPR004582 GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0370 K06662 - gmx:100799826 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0370 3 7317661 7324881 Apr3g0370 3 7317661 7324881 ECH