Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0369 ATGTTGCAAGAAATGTGGAATGCTCCCCCAGGTTTCAGACCCTCCAAATCTGCACCTTCTTCTCCGGCAAAGCCTCTTGGGGTTCTAAGAACTCGCTCTGAATCCTTCCATGTGACACACAAGGTCCCAGTTGGTGATACACCTTATGTCAGAGCAAAAAATGTTCAGTTAGTGGATAAGGACCCGGAGAGAGCAATTCCACTGTTTTGGGCAGCCATTAATGCGGGCGACAGAGTGGACAGTGCTTTGAAAGATATGGCTATTGTGATGAAGCAGCAGAATAGGGCTGAAGAAGCCATTGAAGCAATTAAGTCACTTAGAAGTAGATGTTCAGATCAAGCCCAAGAGTCCCTTGATAATATCCTATTGGATCTTTACAAGAGGTGTGGGAGACTTGATGACCAAATTACTCTCTTGAAGCACAAGCTGTATTTGATTCAACAAGGTTTGGCTTTCAATGGCAAGCGCACAAAGACTGCCAGATCTCAAGGAAAGAAGTTTCAAGTCTCTGTGGAGCAAGAAGCCACTAGATTGCTGGGAAACTTGGGATGGGCACTGATGCAGCAGAACAACTACATGGAAGCCGAAGAAGCGTACCGGCGCGCGCTTTCAATAGCTCCAGACAACAATAAAATGTGCAATTTGGGCATTTGCTTGATGAAGCAAGGGAGAATTGGTGAGGCAAAAGAAACACTGTACCGGGTGAAACCTGCAGTTATTGATGGCCCTAGAGGCTCAGATTCTCATCTTAAAGCCTATGAAAGGGCACAGCAAATGCTCAAAGACCTTGAGTCCGAGATGATGAATAAAGGAGGGGATAGGCTTGAACAAAGCAGGCTCTTTGAAGCTTTTCTTGGTTCTTCATCAATTTGGCAACCTCAGCCTTGCAAGGACCAAACATGCTTTACAGCAACAAATTCAGCCAAAACCCATGATGAGTTTGCAGATGAGAACATCAATTCCAACATAATGGCACCACCACCACCACCACAACATAAAGGTAGCAAACAAGTTGCGATGTTGGGGAACTCACTCAATGTTGCAGCTCCACCGTTTTATGCATCAAAATCATCCATGTTAAGAGAACCAATGGAGAATCAGTTCTCAGAGACCCTTAAGAGAACAAGGTCTGGAAATGCCGCAGGGTCCATGAGAGTGAATAATGATGTAGGGGAGATCCACAAATTGCATGCGGAGTTGGGGGTGCCAGAGAACAACAAAACAAGAAGGCTCTCATCAGAGGATGCTGAAAAGAACAAGTTCACAGATTTGTTACCTGACAACGAGGACTTTGAAGAGGCCATTCTAGCTGCAATTCTGGGACCCTCAAATGAATCAGATAAAACCGCCGCCGCCACCGCCACCTCTGGAATTTTTCAGAGGAAAACTGATAAGAGGCTTAAGGTTTTTCAAGATATTACCTTATCTTTGAGTCCAAGGGCCTGA 1446 0.4523 MLQEMWNAPPGFRPSKSAPSSPAKPLGVLRTRSESFHVTHKVPVGDTPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQITLLKHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYMEAEEAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAVIDGPRGSDSHLKAYERAQQMLKDLESEMMNKGGDRLEQSRLFEAFLGSSSIWQPQPCKDQTCFTATNSAKTHDEFADENINSNIMAPPPPPQHKGSKQVAMLGNSLNVAAPPFYASKSSMLREPMENQFSETLKRTRSGNAAGSMRVNNDVGEIHKLHAELGVPENNKTRRLSSEDAEKNKFTDLLPDNEDFEEAILAAILGPSNESDKTAAATATSGIFQRKTDKRLKVFQDITLSLSPRA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0369 481 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 478 IPR044961 -
Apr3g0369 481 SUPERFAMILY TPR-like 57 283 IPR011990 GO:0005515
Apr3g0369 481 SMART tpr_5 176 209 IPR019734 GO:0005515
Apr3g0369 481 ProSiteProfiles TPR repeat region circular profile. 176 209 - -
Apr3g0369 481 Gene3D Tetratricopeptide repeat domain 49 273 IPR011990 GO:0005515
Apr3g0369 481 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Apr3g0369 481 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Apr3g0369 481 MobiDBLite consensus disorder prediction 1 26 - -
Apr3g0369 481 Coils Coil 89 116 - -
Apr3g0369 481 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 478 - -
Apr3g0369 481 Coils Coil 246 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0369 Apr-Chr3 7310653 7312406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0369 - - adu:107476429 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0369 3 7310653 7312406 Apr3g0369 3 7310653 7312406 ECH