Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0345 ATGAGAGAGAGAATGAAGATAGTGAGTTACAACGTGAACGGCATGAGACCGCGCATAGCGCAGTTTGGGTCTCTCCGGAATCTGCTGAACTCATTCGACGCAGACATCATTTGCTTTCAGGAGACTAAACTAAGGAGGCAGGAAGTCACAGCCGATTTGGTGATGGCCGATGGATACGAATCATTCTTTTCCTGCACCCGCACCTCCGAGAAGGGCCGAACCGGTTATTCCGGTGTTATTACATTTTGTCGTGTAAAGTCTGCATTTTCAAGTAATGAAGTGGCCTTGCCCCTGGCGGCAGAGGAAGGCTTCACTGGTCTTATGGGAAACTCTCAAACTAGCAAAGACGAATTGTCATTCTTGGTGGAAGATCTTGAGGAATTTTCAAAAGATGAGCTTTTAAGTGTTGATTGTGAGGGACGATGCATTATCACAGATCACAGTCACTTTGTTCTTTTCAATGTGTATGGGCCTCGAGCTGGAAGTGATGACATGGAAAGGATTCAGTTTAAGCAAAAATTTTACAGGATATTACAGAAAAGATTGGAGTCTCTCCTGCATCAGGGAAGGAAAATATTTGTTGTTGGTGATCTCAATATTGCACCATTTGCAATTGATCGATGTGATGCAGGACCTGATTTTGATAATAACGAGTTTAGAAGATGGTTCAAATCAATGTTAATTGAAAATGGAGGCCAATTTTCTGATGTGTTCAGAGCAAAACATCCTGATAGAAGAGAAGCATACACCTGTTGGCCACAAAATACAGGTGCTGAAGTATTTAACTTTGGGAGTAGGATTGACCATATTCTGTGTGCTGGTTCATGCTTACATGAATCAGATGACCTGCAATGCCATAGTTTTATAAGATGCCATGTTAAGGAATGTGACATTATGACACAGTACAAACGGTGTAAATCAGAAAGCATACTGAGTGCCCATAGATGGAAGGAGGGAGGACGTAGCATTAAACTGGAAGGATCCGATCATGCTCCAGTTTATATGACTTTACATGAAATTCCTGAGGTCCCTCAGCATAGTACTCCTTCCTTGTCTGCTAGATATGTTCCCATGGTTCATGGCATACAGCAAACTCTAGTGTCAGTGTTGATGAAAAGGCAAGCTTCTGAACGAATGAAGTCATGCAAAATAATACATGAAGGCATTGCAATTGGTAGTACTTGTGGGAGTGAAACAGCAGTTAACAAAGCTGGTTCTGCCACAAGACTAAATGAGTGTCATTTTCCTCCAAGCCAGGATTATGAAGGTGGCATTTTGGAGGCAAATGAACTTTCTGGAGGTTCATCTCAGGAGGCTGTTTCTAAATCAGGAAGTGAATATGAAAAATCAATAACTAGGAAATGTAATAAATCCAAGAAAAAAGCAAGAAATAGTCACTCATCCCAACTCTCACTTTGGTCATTTTTTCAGAAAAGTACACATCTTGACAATGGTGTCAATGACCCATGTACTGATTACTCAAATAATCAGGCAGAACCCTCTCAACCCAATCCTCATTTGCACAAAACTTCTACAGTTTTTGATCATAATAGCAGTCCAAAGCAATATGAGTTGGATAGTGATGCATGTCATCAGGATTTAGCTGAACCAAATGGTAGCTCCACAAAGGAAGAAAAGAGTAATGTGGCTTCACTAGAGTGGCAACGGATACAAAAATTGATGCAGAACAGTATACCTGTTTGCAAGGGCCATAAAGAACCTTGTATTGCCCGGGTGGTAAAGAAACAAGGATCTAATTTTGGACGCAGATTCTATGTTTGTGCTCGTGCTGAGGGTCCTGCATCTAATCCCGAAGCAAATTGTGGTTACTTTAAGTGGGCTACTTCCAAGTCTATGAATAAATAA 1866 0.4116 MRERMKIVSYNVNGMRPRIAQFGSLRNLLNSFDADIICFQETKLRRQEVTADLVMADGYESFFSCTRTSEKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGNSQTSKDELSFLVEDLEEFSKDELLSVDCEGRCIITDHSHFVLFNVYGPRAGSDDMERIQFKQKFYRILQKRLESLLHQGRKIFVVGDLNIAPFAIDRCDAGPDFDNNEFRRWFKSMLIENGGQFSDVFRAKHPDRREAYTCWPQNTGAEVFNFGSRIDHILCAGSCLHESDDLQCHSFIRCHVKECDIMTQYKRCKSESILSAHRWKEGGRSIKLEGSDHAPVYMTLHEIPEVPQHSTPSLSARYVPMVHGIQQTLVSVLMKRQASERMKSCKIIHEGIAIGSTCGSETAVNKAGSATRLNECHFPPSQDYEGGILEANELSGGSSQEAVSKSGSEYEKSITRKCNKSKKKARNSHSSQLSLWSFFQKSTHLDNGVNDPCTDYSNNQAEPSQPNPHLHKTSTVFDHNSSPKQYELDSDACHQDLAEPNGSSTKEEKSNVASLEWQRIQKLMQNSIPVCKGHKEPCIARVVKKQGSNFGRRFYVCARAEGPASNPEANCGYFKWATSKSMNK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0345 621 MobiDBLite consensus disorder prediction 486 524 - -
Apr3g0345 621 Pfam GRF zinc finger 566 615 IPR010666 GO:0008270
Apr3g0345 621 PANTHER AP ENDONUCLEASE 5 611 IPR004808 GO:0004518|GO:0006281
Apr3g0345 621 Gene3D Endonuclease/exonuclease/phosphatase 1 339 IPR036691 -
Apr3g0345 621 ProSiteProfiles AP endonucleases family 1 profile. 5 339 IPR004808 GO:0004518|GO:0006281
Apr3g0345 621 Pfam Endonuclease/Exonuclease/phosphatase family 8 274 IPR005135 GO:0003824
Apr3g0345 621 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2 5 611 - -
Apr3g0345 621 SUPERFAMILY DNase I-like 5 337 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0345 K10772 - gmx:100781120 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0345 3 6816481 6828496 Apr3g0345 3 6816481 6828496 ECH