Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0343 ATGGCACCAGAGAAAACTCTTGATAACCTCTCACAGGAGGAGACTCTAGAATCTAGCTTCGTTCGGGACGAAGACGAGCGCCCCAAAGTGGCCTACAACGAATTCAGCAACGACATTCCCGTTATTTCTCTGGCTGGAATCGACGAGGTTGATGGACGCAGATCAGAGATTTGCCAGAAGATCGTGGAGGCTTGCGAGGATTGGGGTGTATTTCAGGTGGTTGATCATGGTGTTGATGATCAACTTATAGCTCAAATGACGCGTCTCGCTAGAGAGTTCTTCGCTATGCCACCTGAAGAGAAGCTTCGCTTTGACATGTCTGGTGGTGAAAAGGGTGGTTTCGGTGTCTCCAGCCATCTCCAAGGAGAATCGGTGCAGGATTGGAGAGAGATTGTGATATTCTTTTCATACCCAATAAGAGAGAGGGACTATTCAAGGTGGCCAGACACACCTGAAGGGTGGAAAGAGGTGACTGAGGAATACAGCGAGAAGCTGATGGGTTTGGCATGCAAGCTATTGGGGGTGTTATCGGAAGCAATGGGGTTAGAGAAGGAGGCTCTAACCGAAGCATGCGTCGATATGGATCAGAAAGTTGTGATCAATTACTACCCAAAATGCCCCCAACCTGATCTCACGCTTGGGCTTAAGCGTCACACTGATCCTGGCACCATCACTTTGCTTCTTCAAGACCAAGTGGGTGGCCTTCAGGCAACAAAGGATGATGGTAAGACGTGGATAACTGTTCAGCCTGTGGAGGGCGCTTTCGTTGTCAATCTTGGAGACCATGGTCATTATCTCAGTAATGGAAGGTTCAAGAATGCTGATCACCAAGCAGTGGTTAACTCCAATTCTAGCCGTTTGTCCATAGCCACGTTTCAAAACCCAGCACAAAATGCAACTGTGTACCCTTTGAAGGTTAGAGAGGGAGAGAAACCTGTGCTGGAGGAACCAATCACTTTTGCTGAAATGTACAGAAGGAAAATGAGCAAGGACCTTGAGATTGCAAGGATGAAGAAGCTGGCTAATGAAACGCAATTGGAAGAACTTGAGGAGGCAGAACAGGAGTCCGAGCCTGTGAATGAGGTTGTTGATTAG 1095 0.4795 MAPEKTLDNLSQEETLESSFVRDEDERPKVAYNEFSNDIPVISLAGIDEVDGRRSEICQKIVEACEDWGVFQVVDHGVDDQLIAQMTRLAREFFAMPPEEKLRFDMSGGEKGGFGVSSHLQGESVQDWREIVIFFSYPIRERDYSRWPDTPEGWKEVTEEYSEKLMGLACKLLGVLSEAMGLEKEALTEACVDMDQKVVINYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDDGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQNATVYPLKVREGEKPVLEEPITFAEMYRRKMSKDLEIARMKKLANETQLEELEEAEQESEPVNEVVD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0343 364 SUPERFAMILY Clavaminate synthase-like 12 330 - -
Apr3g0343 364 Coils Coil 332 355 - -
Apr3g0343 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 149 IPR026992 -
Apr3g0343 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 295 IPR005123 -
Apr3g0343 364 Gene3D - 5 334 IPR027443 -
Apr3g0343 364 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 348 - -
Apr3g0343 364 Pfam 2OG-Fe(II) oxygenase superfamily 196 294 IPR044861 -
Apr3g0343 364 MobiDBLite consensus disorder prediction 1 23 - -
Apr3g0343 364 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 4 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0343 Apr-Chr3 6793403 6795581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0343 38 305 Glycosyltransferase AT5G59530 34.182 7.96e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0343 K00475 - gmx:732548 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0343 3 6793403 6795581 Apr3g0343 3 6793403 6795581 ECH
Apr3g0343 3 6793403 6795581 Apr7g1097 7 17956781 17959499 ECH