Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0340 ATGGGGGAAGGGAGAGAAGGGGATTGGGAGTGCAGTGGTTGCAACAACAGAAACTACGCTTTCAGATCATTCTGCAATCGATGCAAGCAACCTCGCCTCCTCGTTGATACCAAAACCCCCGCTGATTCAAAGTGGCTCCCTCGTATTGGCGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGCGGACAACCAAAGGAGGTTGCAGCCATGCCAGCTATTGCAATGACCGGAGCATCTTTCCCCACTTATTCACATTATTTTTCCAGGGGCCCCGGAGGACCAGAACAAAAGATGAATATTGGATTGATTGGCAATGGTGTGCCATCGCAGTCACTGCATTTAAACTCCAATTGGCCTGTTACAGGAGCAGATAAGTATGGTGTCCAGCCAGTTTCCTTATGGCTACCAGGTGGAAATTATAGCTCTGGACATCCTCATGAAAATTCCACCAGTCAGAACCTATCTGTTCCAAAGGGATGGCGCAATGGGGACTGGATCTGTAACTGTGGCTTCCACAATTACTCATCACGCTCTCAGTGTAAAAAATGCAAAGCTTTTCCACCTGCACTTGGGACAAAACGGTTAGCTTCTGAAGAGTTAGTTTATGACTGGGACAACAAGAGATTGAATGTAGGAACTACAAATGATCAGCAGCAAACATATACAAGTTTAGAGCAAGTGGTAGGGACAAGTGCAGATCCAAAACCTGGTGTCTTCCCCTCTTATCCCAGCATAAACTCAGAGCAAAGCAATGGCGTAGTGGAGATTGGATGTGCACAAATTGCAACAATCACAATTATGCTTCCAGACTACAGTGTAACAGGTGTAAAACTCAAAGAATGGCACCCATGCAACCCGTTAATGTCGTGTAATGTTGAATTCATTTGTTAA 921 0.4539 MGEGREGDWECSGCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFPTYSHYFSRGPGGPEQKMNIGLIGNGVPSQSLHLNSNWPVTGADKYGVQPVSLWLPGGNYSSGHPHENSTSQNLSVPKGWRNGDWICNCGFHNYSSRSQCKKCKAFPPALGTKRLASEELVYDWDNKRLNVGTTNDQQQTYTSLEQVVGTSADPKPGVFPSYPSINSEQSNGVVEIGCAQIATITIMLPDYSVTGVKLKEWHPCNPLMSCNVEFIC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0340 306 ProSiteProfiles Zinc finger RanBP2 type profile. 5 34 IPR001876 -
Apr3g0340 306 PANTHER OS04G0110600 PROTEIN 3 136 - -
Apr3g0340 306 PANTHER OS04G0110600 PROTEIN 168 231 - -
Apr3g0340 306 ProSitePatterns Zinc finger RanBP2-type signature. 9 28 IPR001876 -
Apr3g0340 306 SUPERFAMILY Ran binding protein zinc finger-like 5 33 IPR036443 -
Apr3g0340 306 SMART zf_4 50 74 IPR001876 -
Apr3g0340 306 SMART zf_4 7 31 IPR001876 -
Apr3g0340 306 SMART zf_4 173 196 IPR001876 -
Apr3g0340 306 ProSiteProfiles Zinc finger RanBP2 type profile. 48 77 IPR001876 -
Apr3g0340 306 PANTHER ZINC FINGER PROTEIN 168 231 - -
Apr3g0340 306 PANTHER ZINC FINGER PROTEIN 3 136 - -
Apr3g0340 306 Pfam Zn-finger in Ran binding protein and others 48 76 IPR001876 -
Apr3g0340 306 Pfam Zn-finger in Ran binding protein and others 5 32 IPR001876 -
Apr3g0340 306 ProSitePatterns Zinc finger RanBP2-type signature. 52 71 IPR001876 -
Apr3g0340 306 SUPERFAMILY Ran binding protein zinc finger-like 169 196 IPR036443 -
Apr3g0340 306 SUPERFAMILY Ran binding protein zinc finger-like 42 76 IPR036443 -
Apr3g0340 306 Gene3D - 166 199 - -
Apr3g0340 306 Gene3D - 42 77 - -
Apr3g0340 306 Gene3D - 3 33 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0340 - - gmx:100801066 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0340 3 6772206 6775261 Apr3g0340 3 6772206 6775261 ECH