Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0339 ATGGAACACAAGGTTATTGGTAACTCCTACAAAAAGTACAACGTGGGTGCCCTGTGTTGGTTAACAGTGTCCATCATTGCAGCTCTCGTAGTAGGTGCCGGTGTTCTTTCTATAGTAACCAAGTTTGATCACTCTGATTCAGCAAAACGTTCTACATCCCCCACCAACGTTGTTCAGAAATATGCCTCTGCTCTTGAATTGGCTCTTCAATTTTTTGACGCCCAGAAATCTGGTAAGCTTCAGAATAACAGGGTTTGGTGGAGAGGGGATTCAGGAGTACGAGATGGTAGTGATGAAGGGAATTTGGATTTATCCAAAGGAATGTATGATGCTGGTGACCTCATGAAATTTGGGTTTCCCATGGCTTTCACTGCTACTGTGCTGTCTTGGGCTATCCTTGAATATGGAGATCGAATGGAAGCGGTGAAGCAGCTACAGTATGCACTGGATTCGTTGAAGTGTATCACGGATTATCTTATTAACGCACACCCTTTTGCAGAAGTGCTATACATTCAGGTGGGCGATCCTGAGGTGGACCATAATTGCTGGGAAAGGCCTGAAAACATGACTGAGGAAAGGCCACTCACTCAAGTTAATTCATCTTCACCGGGAACAGATGTTGCAGCAGAAACTGCGGCTGCACTGGCCTCAGCCTCTCTTGTTTTTAAGGAGATTGATTTCACGTATTCTGAGATTCTTCTGGGACATGCTCAGCAGTTATTTACTTTTGCTGATACATACAGAGTTTCCTATAGTGTCAGCATCCCCCAAGTGGGGAAATACTATAACTCATCTGGTTATGGGGATGAACTCTTATGGGCAGGGACCTGGCTATATCATGCAACTAAGGATCCATCATATCTAGATTATGTAACAGAACAGAATGAGAACACATTTGGCAATTTAGGAAGTTTATCATGGTTTAGTTGGGATGATAAGCATGCTGCAACTCAGGTTCTTTTGTCCAGAGTAAATTTCTTTGGTGCCAGTAACATCCCAGATGAGGAGAACCTTGACCTTCAAATGTATAGAGAAACTGCTGAAATCCTCATGTGCAATCTTCTGCCAGATTCACCCACTGCCAGCACCAACAGAACTGAAAGTGGGTTGATATGGGTGGCACCATGGAACTCTTTGCAACACTCAGTGGCATCTGCATTCTTGGCTGTTCTTTACAGTGACTACATGTTGACATCTCAAACTGAAACTCTGTATTGTAGGGGTAAATTGTATAAGCCCGAAGATCTTCGCAAATTTGCCATTTCTCAGGCAGATTATGTGTTGGGTGAAAATCCTATGAAGATGAGTTATCTTGTGGGATATGGAAGTCATTACCCAAAATATATACATCACAGAGGATCTTCCATTCCAGTTAATGCTACAACTGGTTGCAAGGATGGATTCAGATGGTTTAACTCATCTTACCCCAATCCTAATGTAGCATTTGGAGCTCTAGTGGGTGGCCCTTTCTATAATGACACATATAATGATTTAAGGAACAACTCAATGCAGGCTGAACCAACCACTTATAGTAGTGCCCTCTTGGTTGCTCTCTTATCTGGCTTGGTCGCCAGTTCCTCCCTAGTATGGTCTTTCTAG 1599 0.4315 MEHKVIGNSYKKYNVGALCWLTVSIIAALVVGAGVLSIVTKFDHSDSAKRSTSPTNVVQKYASALELALQFFDAQKSGKLQNNRVWWRGDSGVRDGSDEGNLDLSKGMYDAGDLMKFGFPMAFTATVLSWAILEYGDRMEAVKQLQYALDSLKCITDYLINAHPFAEVLYIQVGDPEVDHNCWERPENMTEERPLTQVNSSSPGTDVAAETAAALASASLVFKEIDFTYSEILLGHAQQLFTFADTYRVSYSVSIPQVGKYYNSSGYGDELLWAGTWLYHATKDPSYLDYVTEQNENTFGNLGSLSWFSWDDKHAATQVLLSRVNFFGASNIPDEENLDLQMYRETAEILMCNLLPDSPTASTNRTESGLIWVAPWNSLQHSVASAFLAVLYSDYMLTSQTETLYCRGKLYKPEDLRKFAISQADYVLGENPMKMSYLVGYGSHYPKYIHHRGSSIPVNATTGCKDGFRWFNSSYPNPNVAFGALVGGPFYNDTYNDLRNNSMQAEPTTYSSALLVALLSGLVASSSLVWSF* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0339 532 Pfam Glycosyl hydrolase family 9 61 519 IPR001701 GO:0004553|GO:0005975
Apr3g0339 532 PANTHER ENDO-1,4-BETA-GLUCANASE 16 532 - -
Apr3g0339 532 PANTHER ENDOGLUCANASE 2 16 532 - -
Apr3g0339 532 SUPERFAMILY Six-hairpin glycosidases 60 525 IPR008928 GO:0005975
Apr3g0339 532 Gene3D - 57 529 IPR012341 GO:0005975
Apr3g0339 532 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 426 452 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0339 Apr-Chr3 6763290 6765987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0339 11 513 Glycoside Hydrolase AT1G75680 60.552 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0339 - K01179 gmx:100782202 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0339 3 6763290 6765987 Apr3g0339 3 6763290 6765987 ECH