Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0319 ATGGCCAATCATACACTGCGTGAAGCCATCATCATGTTATTGATCATGTTCCTTCTCCCTCTTTGGGAGGCCTGCCACGTGGTGGACAAAGAAGCATTACTAGAATTCAAGAGCAGGATCAGCTCAGACCCTTCAAAACTGCTTCATTCTTGGACATCTTCCTCGGACTGCTGCCACCACTGGGAAGGCATCGAATGTGGTTCCATGGGGAGGGTCATCAACCTCACTCGCAATGGCCTAGTTGACAACATTGACGCTGACTTCCCCATTGAAACATTCATGTCTGGAACATTATCACCTTATCTAGGAAACTTGTCCAAACTCCAAGTTTTGGACCTTGGCAATCTGAAACAGTTGCACGGTCCAATACCTCCAGAACTCGCCAATTTATCTCACCTAAGAAAACTTTTCCTCTATTCGAACAATTTCACTGGTGGCATACCAACATCTTTCAAGAAGCTTTCCCAGCTTGAGAATTTGTACCTCGACAACAATCACTTATCTGGTAATGTTCCTTCCTCTGTCTTTTACTCCTTCAGGTATCTTTCAGAACTTGGTTTGTCAGGGAATAAGTTTTCAGGGGGAATCCCATATTCCATTGGAAGCATGGTGTTTCTCACTAGGCTTGATCTTCATAGAAACAATTTCCGTAGCGATATTCCTTCTAGTATTGGTAATCTTATAAATCTCAAGGATTTGGATTTGTCTTATAATGGAATTAGTGGAACCATTCCAGAATCAATTGGGAGTCTTTCACAATTGGTTTTTTTAGATCTGATGCATAACCACATTACGGGAAGCCTCCCTTTTTCTATTGGGGACCTAAGTTCCCTAACATTCTTCAGGTTATCAGAAAATAAGGTAACAGGCATTTTACCTTATTCCATTGGAAGGCTCAAGAATGTGCAAAGACTAATTCTTGAGAACAATAAGCTCACTGGGAAGTTGCCTTCTACTACTGGAAATTTAACCAGTTTGACTGATCTGTTTCTTGCAAACAACCGTTTTGAAGGAAAAATTCCACCTTCCTTTGGCAATTTGATCAACTTGGAAACATTAGATTTGTCAAGAAACCAACTTTGTGGTGAACTTCCTTCTCAGCTTGCTAAATTAAAGGCATTACAGACATTAGACTTGTCATTCAACCCACTAGGACTAACCAAAATACCCAAATGGTTTTCAAAATTGAGAGTTTTTCAGTTGAAATTGGCTAAGACAGGGATTAAAGGTCGACTTCCAAAGTGGCTATCATGGTCCTCTATAGCAACCCTTGATTTGTCAAGCAATGCATTCACGGGAAAACTACCATGGTGGATTGGAAACATGACTCATCTTTCCTTCCTAAACCTGTCAAATAATGGGTTTCATTCGTCGATCCCAGTGGCATTCAAGAACCTTTCTGCTTTAATGGACCTTGATCTTCATTCCAATAAGCTTACTGGCTCCCTCAGTGTGATACTTGAAAAAGAGGTACAGTTTTCACTAGGCCATTATAATTCCGTTGACCTGTCTAACAACATGTTTTCTGGTCCCATTGATGCCAACATTGGAGAAAAGGCCTCGATGAGTTCAATCAAATACCTTGCATTGTCGCATAATGCATTGGGAGGATATATACCAAATTCAATTGGGAAACTGAGGGAATTAGAGATTCTTGACCTTGAGGACAGTGAGCTCTCAGGTAATATACCTGCCGAGCTTGGTGATGTTGAAACATTAACAAAGATTCACCTTTCAAGGAACAAGTTAAGAGGTAACATACCAGAAAAGGTCCTAAATTTGAAGAGCCTTCAAGAGTTCGATGTGTCGTGGAATCGACTCAGTGGGAGAATCCCTCCACATAAGGCCACGTTTCCGATATCAGCTTTTGTGGGTAATCCTGGTCTGTGTGGCCCACCCCTTCTTCCTTGTAAACTTTCTTAG 1923 0.4129 MANHTLREAIIMLLIMFLLPLWEACHVVDKEALLEFKSRISSDPSKLLHSWTSSSDCCHHWEGIECGSMGRVINLTRNGLVDNIDADFPIETFMSGTLSPYLGNLSKLQVLDLGNLKQLHGPIPPELANLSHLRKLFLYSNNFTGGIPTSFKKLSQLENLYLDNNHLSGNVPSSVFYSFRYLSELGLSGNKFSGGIPYSIGSMVFLTRLDLHRNNFRSDIPSSIGNLINLKDLDLSYNGISGTIPESIGSLSQLVFLDLMHNHITGSLPFSIGDLSSLTFFRLSENKVTGILPYSIGRLKNVQRLILENNKLTGKLPSTTGNLTSLTDLFLANNRFEGKIPPSFGNLINLETLDLSRNQLCGELPSQLAKLKALQTLDLSFNPLGLTKIPKWFSKLRVFQLKLAKTGIKGRLPKWLSWSSIATLDLSSNAFTGKLPWWIGNMTHLSFLNLSNNGFHSSIPVAFKNLSALMDLDLHSNKLTGSLSVILEKEVQFSLGHYNSVDLSNNMFSGPIDANIGEKASMSSIKYLALSHNALGGYIPNSIGKLRELEILDLEDSELSGNIPAELGDVETLTKIHLSRNKLRGNIPEKVLNLKSLQEFDVSWNRLSGRIPPHKATFPISAFVGNPGLCGPPLLPCKLS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0319 640 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Apr3g0319 640 Gene3D Ribonuclease Inhibitor 392 517 IPR032675 -
Apr3g0319 640 Gene3D Ribonuclease Inhibitor 197 290 IPR032675 -
Apr3g0319 640 Gene3D Ribonuclease Inhibitor 27 196 IPR032675 -
Apr3g0319 640 ProSiteProfiles Leucine-rich repeat profile. 229 251 IPR001611 GO:0005515
Apr3g0319 640 SMART LRR_sd22_2 594 609 - -
Apr3g0319 640 SMART LRR_sd22_2 130 159 - -
Apr3g0319 640 SMART LRR_sd22_2 323 352 - -
Apr3g0319 640 SMART LRR_sd22_2 371 388 - -
Apr3g0319 640 SMART LRR_sd22_2 227 253 - -
Apr3g0319 640 ProSiteProfiles Leucine-rich repeat profile. 349 372 IPR001611 GO:0005515
Apr3g0319 640 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Apr3g0319 640 Pfam Leucine rich repeat 131 192 IPR001611 GO:0005515
Apr3g0319 640 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Apr3g0319 640 SUPERFAMILY L domain-like 95 481 - -
Apr3g0319 640 Gene3D Ribonuclease Inhibitor 521 637 IPR032675 -
Apr3g0319 640 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 11 638 - -
Apr3g0319 640 Gene3D Ribonuclease Inhibitor 291 391 IPR032675 -
Apr3g0319 640 PRINTS Leucine-rich repeat signature 230 243 - -
Apr3g0319 640 PRINTS Leucine-rich repeat signature 347 360 - -
Apr3g0319 640 SMART LRR_typ_2 323 346 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 522 546 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 275 298 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 299 322 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 227 251 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 130 153 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 347 370 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 371 395 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 154 178 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 442 465 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 466 489 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 594 625 IPR003591 -
Apr3g0319 640 SMART LRR_typ_2 203 226 IPR003591 -
Apr3g0319 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 638 - -
Apr3g0319 640 SUPERFAMILY L domain-like 401 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0319 Apr-Chr3 6315448 6317370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0319 7 640 Receptor kinase-like Gene Family AT4G08850 33.673 6.49e-88 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0319 - - gmx:102664464 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0319 3 6315448 6317370 Apr3g0319 3 6315448 6317370 ECH