Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0314 ATGATGAGAAGAAAGCAGCATAAAGGATATTCAGAGAAAAACGACGTCCCCATCGTTGACATTGATAGCGACGACGAAGCCGTCGTCGCGGCAGGTCCTCCAAAAAACGACACGTCGTCGTCCCAGAAGGCTTCATCGCAACAAGTTGAGCTTGTGCAACAAGAAACCCCTGCGTCAAGTTCAGCTCCGTCGGTATCCCACAGCCAAAACGTTGCTTCTAGAAGTTTCTGGAAAGCAGGGGATTACGTTGTTGGGCCCTCTTCGAAGCCAGCTCCCTTTCAAGGTCACTTGGAACATGCTCGGGTTCATCCCAAGTTTCTGCATTCTAATGCAACTTCTCATAAATGGGCTTTTGGAGCAATTGCTGAGCTGGTGGATAATGCTGTTGACGAGATTCAATCCGGTGCAACTTTTGTAAAGATTGATAAGCTTGATATCATGAAGGATAATTCACCAGCGTTATGTTTCCTAGATGATGGTGGTGGAATGGATCCTAATGCAATACGGAAATGCATGAGCTTGGGTTATTCCTCAAAGAAGTCAAAGACAACAATCGGACAGTATGGCAATGGATTCAAGACTAGTACCATGAGACTGGGTGCTGATGTTATTGTTTTTAGTCGTTCGATGCATTCAAGCCGGGCAACACAAAGTGTGGGTCTACTATCCTATACCTTTCTGCGAAGAACTGGGCAAGATGACGTAATTGTGCCGATGATAGATTTTGACATATCTGGCTATTGGCCTGAGCCCATTATTTATAGCTCACAGGATGAATGTTCAGCAAACTTGAAAACAATTCTTGATTGGTCTCCCTTCACAACAAAGGAGGAGCTCATGCTTCAGTTTGACGATATTGGATCACATGGAACCAAAATTTTAATTTACAATTTGTGGTTGAATGATGAAGGCATATATGAATTGAGTTTTGATGATGACGCTGAGGATATTATGCTGAGAGATGAGGCCAACCATGGATCTGTGCACAAGTTGAGCAAAAGAACTGTTCATCTTCGGTCACATATTTCTTACCGCATCCGTCACTCTTTACGGGCATATGTTTCATTGTTGTACCTTAGAAAATTTTCTAACTTCAAAATCATACTAAGGGGAAAACCTGTGGCCCAGTTTGACATTGTGGATGAATTAAGATATTCAGAAGTAATTAGATATAAGCCCCAGCAAGCCGTGACATCAAATGAGGCTACAGTGGTGACAACCATTGGATTTCTAAAGGAGGCTCCACGTATTAATGTTTCTGGATTTAATGTGTATCACAAAAATCGCCTGATCAAGCCCTTTTGGAAAGTAGTTCCAGAAGGTTCATCAAAAGGGAATGGTGTTGTCGCCAATTTTGTAGAACCAGCGCATGACAAGCAGGACTTTGAGAGATCATCGCTGTACATACGGTTGGAAACAAAGCTTAAGCAAATGACAAATGATTACTGGAAAGGTCACTGTCACTTAGTTGGATATCAGCCACTAAATTTCAGATCACAAAATGTGGAAAAGGAAGCCCGCATTCAAAAATCAGCTGGACATTCAACTAATTCACAGAATGAGTTACTTGCTGATCAAGGGAATATTGGCTTGGTTATTGAGCATCAAAACAACCTGAGTTTAAATCAGCCAATTGGTACCTCGGTAGGAGCTCCATGGTCTCTGTCCGTTGATGAAATCTGTGAAGAAAACATAAAACTTTTCATGAGGTGCGAGGAGTACAGGCTGAAAGAGACAGAGTTGAAACAGACGGTTGTGGACTTGGAGGAGGAATTGAAAGAAATCCAGAACAAATGTGCCCATATTTCTTCACTCTTAGAGGCTAAGAGGAAGCAGGAGAGTGTAAGGAAGCACTAA 1857 0.4238 MMRRKQHKGYSEKNDVPIVDIDSDDEAVVAAGPPKNDTSSSQKASSQQVELVQQETPASSSAPSVSHSQNVASRSFWKAGDYVVGPSSKPAPFQGHLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQSGATFVKIDKLDIMKDNSPALCFLDDGGGMDPNAIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADVIVFSRSMHSSRATQSVGLLSYTFLRRTGQDDVIVPMIDFDISGYWPEPIIYSSQDECSANLKTILDWSPFTTKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDEANHGSVHKLSKRTVHLRSHISYRIRHSLRAYVSLLYLRKFSNFKIILRGKPVAQFDIVDELRYSEVIRYKPQQAVTSNEATVVTTIGFLKEAPRINVSGFNVYHKNRLIKPFWKVVPEGSSKGNGVVANFVEPAHDKQDFERSSLYIRLETKLKQMTNDYWKGHCHLVGYQPLNFRSQNVEKEARIQKSAGHSTNSQNELLADQGNIGLVIEHQNNLSLNQPIGTSVGAPWSLSVDEICEENIKLFMRCEEYRLKETELKQTVVDLEEELKEIQNKCAHISSLLEAKRKQESVRKH* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0314 618 Gene3D - 103 297 IPR036890 -
Apr3g0314 618 PANTHER PROTEIN MICRORCHIDIA 1-RELATED 12 614 - -
Apr3g0314 618 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 117 301 IPR036890 -
Apr3g0314 618 MobiDBLite consensus disorder prediction 1 69 - -
Apr3g0314 618 Coils Coil 571 605 - -
Apr3g0314 618 Pfam Morc6 ribosomal protein S5 domain 2-like 348 483 IPR041006 -
Apr3g0314 618 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 119 214 - -
Apr3g0314 618 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 12 614 IPR045261 GO:0016887
Apr3g0314 618 MobiDBLite consensus disorder prediction 34 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0314 Apr-Chr3 6125849 6174943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0314 - - gmx:100781431 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0314 3 6125849 6174943 Apr3g0314 3 6125849 6174943 ECH