Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0311 ATGGAGCAATTAGGCATCGTGAGTGAAGTGAAACACCAAAGAATAAAAACGAACGGAGTATGGATACATGTGGCAGAGAAAGGGACAGGACCACTAGTTCTACTGCTTCATGGGTTCCCAGAAATATGGTATTGCTGGCGCCACCAACTCAACTTTTTGGCCCAACATGGTTATCATGCAATTGCACCTGATCTCAGAGGATATGGTGACTCTGATTCTCCTATTGATCCTAGTTCCTACACTGTTCACCATGTTGTAGGTGACCTTATAGGTTTGCTTGACCATTTTGGTGAACAACAGGCATTTGTAGTTGGATCTGACTGGGGAGCAAATATTGGATGGCAACTGAGCCTGTTTAGGCCTGACAGAGTGAAGGGATTTGTTGCTATTGGGGTTCCTTATTATCCAAGATCTCCTACTGCTAAAACTGTTGAAACTATTAGAAAACTGTATGGAGATGAGAGTCATGTCTGCCAGTTTCAGGAACCAGGGCGAGCAGAGAGAGCATTTGCTAGATATGATTGTCTGACAGTGATGAAGAAGTTTTTGCTGATAACATGGACAGATTTTCTAGCAGCTCCTCCTGGCATGGAGATTATTGATTTCTTGCCAACACCTTCGGTTTTGCCATCATGGATAACTGAGGAGGAACTCATGGTCTTTGCTGACAAATTCCAAGAATCTGGTTTCACTGGTCCACTCAATTACTACCGTGCAATGGACCTAAACTGGGAGCTTCTTGCACCATGGCAAGGAGCAAAGATAACAGTTCCAACAAAGTTCATTGCTGGAGCCAAAGACATCGGTTTTGAAAGTGGTGGCACAAAGAATTTTGTGGAAAGTGATATCTTTAAGAGCCTTGTTCCCAACCTTGAAGTGGTTATACTAGATGGCCATCATTTTATACATCAAGAAAAGGCCCAGCAAATTTCAAATGAAATCCTTTCCTTCATCGGTTCTGGCTCCAAGGCGTAG 975 0.4328 MEQLGIVSEVKHQRIKTNGVWIHVAEKGTGPLVLLLHGFPEIWYCWRHQLNFLAQHGYHAIAPDLRGYGDSDSPIDPSSYTVHHVVGDLIGLLDHFGEQQAFVVGSDWGANIGWQLSLFRPDRVKGFVAIGVPYYPRSPTAKTVETIRKLYGDESHVCQFQEPGRAERAFARYDCLTVMKKFLLITWTDFLAAPPGMEIIDFLPTPSVLPSWITEEELMVFADKFQESGFTGPLNYYRAMDLNWELLAPWQGAKITVPTKFIAGAKDIGFESGGTKNFVESDIFKSLVPNLEVVILDGHHFIHQEKAQQISNEILSFIGSGSKA* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0311 324 PRINTS Alpha/beta hydrolase fold signature 57 72 IPR000073 -
Apr3g0311 324 PRINTS Alpha/beta hydrolase fold signature 103 116 IPR000073 -
Apr3g0311 324 PRINTS Alpha/beta hydrolase fold signature 117 130 IPR000073 -
Apr3g0311 324 Pfam alpha/beta hydrolase fold 31 137 IPR000073 -
Apr3g0311 324 PANTHER EPOXIDE HYDROLASE 4 318 - -
Apr3g0311 324 SUPERFAMILY alpha/beta-Hydrolases 9 319 IPR029058 -
Apr3g0311 324 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 4 318 - -
Apr3g0311 324 Gene3D alpha/beta hydrolase 7 321 IPR029058 -
Apr3g0311 324 PRINTS Epoxide hydrolase signature 37 55 IPR000639 GO:0003824
Apr3g0311 324 PRINTS Epoxide hydrolase signature 57 72 IPR000639 GO:0003824
Apr3g0311 324 PRINTS Epoxide hydrolase signature 103 116 IPR000639 GO:0003824
Apr3g0311 324 PRINTS Epoxide hydrolase signature 117 130 IPR000639 GO:0003824
Apr3g0311 324 PRINTS Epoxide hydrolase signature 257 273 IPR000639 GO:0003824
Apr3g0311 324 PRINTS Epoxide hydrolase signature 295 317 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0311 Apr-Chr3 6009613 6011950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0311 6 324 Acyl Lipid Metabolism Gene Families AT3G51000 64.396 1.67e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0311 - - gmx:100818894 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0311 3 6009613 6011950 Apr3g0311 3 6009613 6011950 ECH