LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g0309	ATGAGGTATTCCCCATTCAAATACTTATCAAATCTCCGCAAAACCCTAACCCAAAACCCGAACTTCGCTTCTCCACGGATTTCAACACCGTGCATCTTCTCACGCAATGATCAATCGAATTCGGAACCCAAGCCTCGTTCCTTCTTCGTGCGCTGTTACACCAGCGCTTCGCAGCCTCAGGATTCGGAGAAGGTGTCATCGATCGTGGACGAGGTGATGGGGCTAACGCTGCTGGAAGTGATGGACCTAGTGGAAGTAATGCGCGAGAAGAGGGGCATCAACGAGCTTCCGATCATGATGTTGATGGTGCCGGGGATGGGTGTGAGGGGTGTGCCGAAGGGTGCATCGAAGGGGGGAGGAGGTGGTGGCGGCGGAGTTGGAGTGGAAGAGAAGAAGGCGGAGAAGACGGCGTTTGATGTGAAGCTTGAGGGTTTTGATGCTGCGTCGAAGATCAAGGTTATCAAAGAAGTAAGGACGTTTACTAGCTTGGGTTTGAAGGAGGCCAAGGATTTGGTGGAGAAGGTTCCCACTGTTTTGAAGAAGGGTATCACCAAGGAAGAGGCCGAGACTATTATTGCCAAGATGAAGGAGGTTGGCGCTAAAGTTTCTATGGAATAA	618	0.5113	MRYSPFKYLSNLRKTLTQNPNFASPRISTPCIFSRNDQSNSEPKPRSFFVRCYTSASQPQDSEKVSSIVDEVMGLTLLEVMDLVEVMREKRGINELPIMMLMVPGMGVRGVPKGASKGGGGGGGGVGVEEKKAEKTAFDVKLEGFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGITKEEAETIIAKMKEVGAKVSME*	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g0309	205	Gene3D	-	132	204	IPR014719	-
	Apr3g0309	205	Hamap	50S ribosomal protein L7/L12 [rplL].	62	205	IPR000206	GO:0003735\|GO:0005840\|GO:0006412
	Apr3g0309	205	Pfam	Ribosomal protein L7/L12 C-terminal domain	138	204	IPR013823	GO:0003735\|GO:0006412
	Apr3g0309	205	SUPERFAMILY	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	64	139	IPR036235	GO:0003735\|GO:0005840\|GO:0006412
	Apr3g0309	205	SUPERFAMILY	ClpS-like	134	204	IPR014719	-
	Apr3g0309	205	Pfam	Ribosomal protein L7/L12 dimerisation domain	64	104	IPR008932	GO:0003735\|GO:0005840\|GO:0006412
	Apr3g0309	205	CDD	Ribosomal_L7_L12	63	204	IPR000206	GO:0003735\|GO:0005840\|GO:0006412
	Apr3g0309	205	PANTHER	39S RIBOSOMAL PROTEIN L12	54	205	IPR000206	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr3g0309	Apr-Chr3	5966911	5969386	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr3g0309	K02935		-	gmx:100775592	251.521

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr3g0309	3	5966911	5969386	Apr3g0309	3	5966911	5969386	ECH