Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0306 ATGGCCAAATCCATTAGAACGGAAGCAAAGGGTGGTGATAGAATGAGAATGGGAAGTGACAGCGAAAGTGAAGAGAGATGGCGTTACACATGGGAAGCACAGTCCCACATCCCAACGCTTCGCTTAATGCTATTTCCCCAAAACAAAACCCTCATTCCTTCTCTCCAATGCCACAACCTCAACGTCCACCTTCATTCCTCGCACTCTTTTCTCATCCTCACTTTCTCCTCCCTCTCCCTTAGGGTTCCACTCCCTTCCGTTTTGGTCGACGCCGATTCTCCGATCACATTCCGACCACTCTCCGACCACATTCAGGTCAAGCTCGTCCTCCTCCTCCCCGTCGACCACCCTGTCCTCTCCACCCTCAACCTATCGCAAACTTCGCCGCCGCACGCTTCCGTACCTCTCCAAATGGAATCTGATGTGAAAACATTGTCTTCTGGAGGAGAAGTTGACTTTTACTGCAGAAGTTGCGCCTTCAAGTTGACCAAAAGTCCTCTCAAGAATTTTGTTGAAATGCCATCGGCAAATTGGAGAGAGGTAGCTGACAACTGGTTTGGGGCTTGTTGTTGTTCATTTGGAGGAATAAGTGAGAAGTTGGTGATGAAGTATGTAAATTCTCATACATGTGCGCCAGGGTTATGCTTATTAAGCTCCACATCTATCACTCTTTGCAAGGATGATCTTGTGGAATGTGATTTTCCTGAAGGGTGTGGACAACAAGAGTGTACTTCTATGGCTGAAAAACCCAGAGATGATGGTGTTAGCAAAGGCACAAGAAAATCTGAATTAAATGAAGAAAAAACTTCAACTTGCGGTGATGCGTATGGAGTGACCCATGCTCATGATGAGAACTCAAGGTTTGCAAATCGTGAGAATGAAAAGCTTTCCGTGAATTTTAGATGTGAAGTGGCTGAGAATAAACCTGATCATGGTGACTTCTTTCATTCACATCCAGATTCAAATGATGCTGAAGACGTGACCCAAACTACTAGTTGTTGTGCTCATATGACGAACGTAGTTGTGGATGAAGACAGTGAATGTCATTTATCTGGAACTGCTAGAAAGGGACAGATGCCTACAGAGACCATGGAAATTCTGGGCAATCAACAATCTTTCCTCAATGGTTTTCTTGAAGATGTTTTCATGGCTAGATCATCAAATCTTTCAAAGGATATTGATTGGCATGAATTTATGTGCCCTCAATGCTTGTCTCTTCTTGGAGCCTACCCTTGTTGTGAGGACCATGCACCTGTAGATGGAGGAGTACGATTATTTAAATGTTATATTTCAACCTGTGTGCCAGTTGGAGGATCAGGCAACATGATCAGCAAATATACAATGGACAAAATGTTCGCAAATCGGTTGATGGAGTGTGCAAATGATGAATCATCATTTCGGTTTGTTATTAGAGATCTGACAACCCAATCGCTTGTCCTGCAAATTATTCTTTTAAATCCAGATATATGGTCTTGTTCTGGTAATTGTTCTAGTACAGAGGACAAAGAGCCAGTTCCTAAATTGCTGTTACGCCCCACCATCAAAGTGCTTTTTTCTGAATGTAATGCTGCAACAGAATCTCAATTAAGGATGATAGAAGAATGGGCAACAAAGAATTCGGCTGAAAACATTTTTATGTTGACTCATCAATTACAAGAATTGGTGGGGTCGTTGATGTCAGCAAAAGACTCATATCCACCTTCATGTGCTTCCCTTCAAGGTTTGTTTTTGTCCTCTGTGCTGCGGTAG 1749 0.4317 MAKSIRTEAKGGDRMRMGSDSESEERWRYTWEAQSHIPTLRLMLFPQNKTLIPSLQCHNLNVHLHSSHSFLILTFSSLSLRVPLPSVLVDADSPITFRPLSDHIQVKLVLLLPVDHPVLSTLNLSQTSPPHASVPLQMESDVKTLSSGGEVDFYCRSCAFKLTKSPLKNFVEMPSANWREVADNWFGACCCSFGGISEKLVMKYVNSHTCAPGLCLLSSTSITLCKDDLVECDFPEGCGQQECTSMAEKPRDDGVSKGTRKSELNEEKTSTCGDAYGVTHAHDENSRFANRENEKLSVNFRCEVAENKPDHGDFFHSHPDSNDAEDVTQTTSCCAHMTNVVVDEDSECHLSGTARKGQMPTETMEILGNQQSFLNGFLEDVFMARSSNLSKDIDWHEFMCPQCLSLLGAYPCCEDHAPVDGGVRLFKCYISTCVPVGGSGNMISKYTMDKMFANRLMECANDESSFRFVIRDLTTQSLVLQIILLNPDIWSCSGNCSSTEDKEPVPKLLLRPTIKVLFSECNAATESQLRMIEEWATKNSAENIFMLTHQLQELVGSLMSAKDSYPPSCASLQGLFLSSVLR* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0306 582 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 50 572 IPR019193 -
Apr3g0306 582 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 22 579 IPR019193 -
Apr3g0306 582 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0306 - - gmx:100791241 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0306 3 5899950 5903459 Apr3g0306 3 5899950 5903459 ECH