Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0298 ATGGAAGTAGCACAGGTGTTGCATATGAATGGTGGCATTGGAGAAGCAAGCTATGCCAACAACTCCTTAGTTCAGCAAAAGGTGCTTCTTTTGGCAAAGCCCATTAGAGAGGAAGCAATAACCAGCCTCTACTACAACACACTTCCAAGAAGCTTAGGAATTGCAGACTTGGGTTGTTCTTCAGGACCCAACACCCTGTTTGTTGTGTCTGAAATAATAAAGACTGTGGAGAAGCTTTGCCGTCAACTTAACCAAAAATCTCCCGAATACAAAGTCTTTCTTAATGATCTTCCCGGGAATGACTTCAATAACATCTTCAAGTCCCTTGACAGCTTCAAAGATAAACTATGTCGTGAAATGGAAACTGCCATTGGTCCATGCTACTTCTCTGGAGTTCCTGCTTCTTTCTATGGCAGGGCTTTTCCTAATAGAAGTCTGCATTTTGTGCATTCCTCTTACAGCCTCCAGTGGCTATCTAAGGTTCCGGAGGGTGTAGAGAACAACAGGGGGAACATTTACATCGGCAGAACAAGCCCTCCAAATGTTCTAAAAGCATACTACGAACAATTTCAAAGAGATTTCTCTCTTTTTCTCAAGTGCCGTGCAGAGGAGCTAGTTGAAGGTGGTAGCATGGTTCTCACATTTTTGGGAAGAAGAAGCGATGATCCATGCAGTAAGGATGGTTGCTACATTTGGGAGCTTATGGCTACTGCTCTTAATGATATGGTCTTCGAGGGAATCATAAAGGAAGAGCAAATTGATACATTTAACATCCCTCAATACACTCCATCTCCAACCGAAGTGAAATCGGAGGTTCTTAAAGAAGGATCATTCACTCTGAATCGTCTAGAGGTGTCTGAAGTGAATTGGAACGCTTTTGATGACTGCTGGAACGCTCAAGAATATGAATCTAAAAAGTCTGAATCACTTAGTGATGGTGGGTACAATGTGGCACAGTGCATGAGGGCTGTGGCTGAACCTTTACTAATTAGCCATTTTGGTGAAGCTATCATTGAAGAGGTTTTCAGTCGCTACCAACAAATCTTGGCTGATCGTATGTCCAAGGAAAAAACTGAGTTCATCAATGTTACCATATTATTGACTAGAAAAGCATGA 1116 0.422 MEVAQVLHMNGGIGEASYANNSLVQQKVLLLAKPIREEAITSLYYNTLPRSLGIADLGCSSGPNTLFVVSEIIKTVEKLCRQLNQKSPEYKVFLNDLPGNDFNNIFKSLDSFKDKLCREMETAIGPCYFSGVPASFYGRAFPNRSLHFVHSSYSLQWLSKVPEGVENNRGNIYIGRTSPPNVLKAYYEQFQRDFSLFLKCRAEELVEGGSMVLTFLGRRSDDPCSKDGCYIWELMATALNDMVFEGIIKEEQIDTFNIPQYTPSPTEVKSEVLKEGSFTLNRLEVSEVNWNAFDDCWNAQEYESKKSESLSDGGYNVAQCMRAVAEPLLISHFGEAIIEEVFSRYQQILADRMSKEKTEFINVTILLTRKA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0298 371 Gene3D Vaccinia Virus protein VP39 21 358 IPR029063 -
Apr3g0298 371 Gene3D - 6 356 IPR042086 -
Apr3g0298 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 370 IPR029063 -
Apr3g0298 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 369 IPR005299 GO:0008168
Apr3g0298 371 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 369 - -
Apr3g0298 371 Pfam SAM dependent carboxyl methyltransferase 38 369 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0298 Apr-Chr3 5801570 5804827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0298 K21483 - gmx:100170650 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0298 3 5801570 5804827 Apr3g0298 3 5801570 5804827 ECH