Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0268 ATGAGATATAGGGTTTCGTATTTGATGGATGAGATCTGGGAGAGGGCTGTCGAAACGGCGTTAGACGGCGAGAAGGACCACGCCTCCGCTCGAACCCTAACCCTAGACGGCGCCGTTAAGTGCGTCCAGGGACGGTTACCCCCTCCGAGCCTTCTCGAAAGGTTCCAGAACCTTCAGCACCTGTCGATTGCAAACGTCGGCGTTTCCTCTCTGGAGCAGTTTCCGCGGCTCCGGAATCTTCAGAAGTTGAACCTCTCCGACAACCGTATCGCCGGCGGGCTCGAGTTTTTGGTCCAAGCTGGTCTCGATTCACTTCGAGACCTCGATCTCTCCAACAATCGGATTCAGTACATTGAGGATCTCGCGCCACTCGCGCAGGTGAAGCTGGTTTCGCTGGATCTGTATGAGTGTCCCGTGACGCGCGTTAAGGATTATCGATCTAGGGTTTTCGGGTTGATTAAGTCGCTTAAGTACTTGGATAAGATGGATGCTGAGGAGAACGAGAGGCCCGAGTCTGATGATGAGGAAGAGGAAGATGAGGAGGAGGAAGAGGATGATGATCCTGGGAGTGGAGAGATTGATGGAGAAGAGGATCGACCTTTTGGAATGAACAATGGACACAGTGAAGGTGTTGATGGTGTTGTTGATGCTGACGAGGAAGAAGAGAGTGATGCGGATGAAGAGGAGACGGAGACTTCTAGGCGAAGGGTGAATGGGGATAGTCATCAGGAGAATGGATTTCGTGTTGCTCCAGTAGTGGGGGATGATGTGGAGGAGGAGGATGATGATGATGATTCCGGGGAGGAGATTGATGAGGAGGAGGGTGATGATGATGATGTGGTTGAGGTTCATGAGATTGAAGATAGTGATGATGAGGAGGATGGAGTGGAGTATGATGAGGATGATGATGATGAAGATGATGAGGAGGAGGAAGAAGTGGATAATGATGAGGGGGATCTTGCGGAGCCGGAGAGTACTGGACGGTTGACGAGCACGGAGGGTGAGATTGATGGTCATGAACAGGGGGAGGAGGATGGAGATGATGATGATAATGGGGAGACTGGTGAGGATGAGATGGGGGTAGAAGATGATGGAGAGTTTGAAGATGATGATGAAGAAGAAGAAGACTATGGTGCTGGATATCTTGTTCAGCCTGTTGGGCAGTCTGATGCTCTCAATGCTGGAGGTGCTGATGTTGATGGTGGGAATGATGATGGTGAAGAGGAGGAGGAAGTTGATGATGATGATGATGATGATGTTCAGGTGTTGCCTCCTGACTCTTCACACCGCAAGAGGAAGAGGGATGACGATGATGATGAAGACGAAGAAGACAATGAAGATGACGACGATGTTGTAGCTTTCACAAAGTCACCCAAGAAGCATCATTGA 1389 0.5032 MRYRVSYLMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEDEEEEEDDDPGSGEIDGEEDRPFGMNNGHSEGVDGVVDADEEEESDADEEETETSRRRVNGDSHQENGFRVAPVVGDDVEEEDDDDDSGEEIDEEEGDDDDVVEVHEIEDSDDEEDGVEYDEDDDDEDDEEEEEVDNDEGDLAEPESTGRLTSTEGEIDGHEQGEEDGDDDDNGETGEDEMGVEDDGEFEDDDEEEEDYGAGYLVQPVGQSDALNAGGADVDGGNDDGEEEEEVDDDDDDDVQVLPPDSSHRKRKRDDDDDEDEEDNEDDDDVVAFTKSPKKHH* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0268 462 SUPERFAMILY L domain-like 48 164 - -
Apr3g0268 462 MobiDBLite consensus disorder prediction 214 228 - -
Apr3g0268 462 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Apr3g0268 462 MobiDBLite consensus disorder prediction 401 421 - -
Apr3g0268 462 MobiDBLite consensus disorder prediction 163 462 - -
Apr3g0268 462 SMART LRR_sd22_2 102 123 - -
Apr3g0268 462 SMART LRR_sd22_2 77 96 - -
Apr3g0268 462 MobiDBLite consensus disorder prediction 167 193 - -
Apr3g0268 462 Pfam Leucine-rich repeat 64 173 - -
Apr3g0268 462 MobiDBLite consensus disorder prediction 422 437 - -
Apr3g0268 462 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Apr3g0268 462 MobiDBLite consensus disorder prediction 338 378 - -
Apr3g0268 462 MobiDBLite consensus disorder prediction 255 320 - -
Apr3g0268 462 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 460 IPR045081 -
Apr3g0268 462 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0268 - - zju:107424836 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0268 3 5244976 5248833 Apr3g0268 3 5244976 5248833 ECH