Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0254 ATGGGAGGGCAATCTAGCAAGATGATTACTGCTGATACCCCAACAGCCATTAAAATGGGTACTCATTCTCTGTATGCTGCTGATTTGAGCTCCTACGAAGCTGCATGTGTTAAAGATCCAAACTTGCAATCTTTTGATGTGAGCATTCAGGAACATACCAACAGGGTGATTAGTTCACTTGCTCATGGGGTTGAGGTTAGATCCTTATCTTTTGACTCACTGAGAGAAGTGACTGATAGTCTGCTTGAGATGAACCAGGAAGTTGTCAAAGTCATTTTGGACTGCAAGAAAGATGTATGGGGCAACAAGGATTTGTTCTCTTTGGTGAGTGATTATTTTGATAATAGCCTCCAAACATTGGAATTCTGCAACTCCCTTGAGAAATGCTTGAGGCGTGCTCGTGAGAACCAGATGATAGTCAAGTCAGTGATTACCTACTTTGAGGAAGAGGTGCAAAATGGGATTGAAGGCGTGAGTTATGTGAAGACATTGCAAGAGCTTAAGAACTTTAAGGATGCCGGGGACCCCTTTACAGAAGAGTTTTACTTGCTGTTTCAATCAGTTTACACGCAGCAGGCATCGATGTTGCAGAAATTGCAAATCAGAAAGAGAAAGCTTGATAAGAAATTGAAATCCCTCAAGACTTGGAAGAGAGTGTCTAATGCCATTTTTGTGGCTGCTTTTGTTGCTGTGTTAATTTTCTCAGTGGTGGCAGCTTCTGTTGCTGCGCCTCCGGTTGTAACAGCTTTGGCTGCTGCATTGGCTGTTCCAATAGGATCAGTAGGAAAATGGTGCAACTCGCTCTTTAAGGGCTACCAGAAAGCTCTAAAGGGACAACGGGAGGTAATCAGCTCAATGCAGGTTGGTACTTACATTTCATTGAAGGACTTGGACAACATTCGAGTGCTTACCAACAAATTGGAAGTAGAGCTTGAATCATTGTTGCAGAATGCTGATTTTGCTCTTAGAAATGAGGATGTTATAAAGTTTGCTATTGATGAGATTAAGAAAAGAATAGAAACCTTTTCAGAGACTATGGAGACTTTGAGTGCTCATGCTGATAAATGCAGTCGACAGATAAGGAAAGCAAGGACTGTGGTTATACAGAATATAATTAAGAAACCTGATTAA 1131 0.4138 MGGQSSKMITADTPTAIKMGTHSLYAADLSSYEAACVKDPNLQSFDVSIQEHTNRVISSLAHGVEVRSLSFDSLREVTDSLLEMNQEVVKVILDCKKDVWGNKDLFSLVSDYFDNSLQTLEFCNSLEKCLRRARENQMIVKSVITYFEEEVQNGIEGVSYVKTLQELKNFKDAGDPFTEEFYLLFQSVYTQQASMLQKLQIRKRKLDKKLKSLKTWKRVSNAIFVAAFVAVLIFSVVAASVAAPPVVTALAAALAVPIGSVGKWCNSLFKGYQKALKGQREVISSMQVGTYISLKDLDNIRVLTNKLEVELESLLQNADFALRNEDVIKFAIDEIKKRIETFSETMETLSAHADKCSRQIRKARTVVIQNIIKKPD* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0254 376 PANTHER UPF0496 PROTEIN 3-RELATED 1 373 IPR007749 -
Apr3g0254 376 Pfam Protein of unknown function (DUF677) 42 371 IPR007749 -
Apr3g0254 376 Coils Coil 297 324 - -
Apr3g0254 376 Coils Coil 332 352 - -
Apr3g0254 376 Gene3D - 102 371 - -
Apr3g0254 376 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0254 Apr-Chr3 4798443 4800690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0254 - - gmx:100782901 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0254 3 4798443 4800690 Apr7g0988 7 16917666 16919693 ECH
Apr3g0254 3 4798443 4800690 Apr3g0254 3 4798443 4800690 ECH