Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0253 ATGGCGTTCAAGAAAACTCTGGCCCAGCGCCTCCTCAGCATCACCAAAATCTCCAACTGTCGCATTTCCTCTTCTTCTTCCTTTCAGTCTCGAATTGCTTCCACCGCCGGGAAGCCTGACATTGCTCCAGATCCCGGAGACAATGGAATCTTCCGCCGGTTCCTCCACAAGAGACCCTTCTTCTCGCCGGAGCTCCGGCCTCCGGCCGCCAATAACCTCCTCCTGATGCTCCGGGAGATGGACATTGCGAGGAGCCGAATCCGATTGGACGGTCTGACTCCGCCGGAGAAAGAAGGAATGGCGGTTGAAGACGTGCGGAAGTTGCTGAGAGCAACGCAACTCGAAACGGTGAAATTGAAGCTGCGGAAGGTTCCGGAGAGTTGCATAGCTTATTCGGAGTTCATTCGAATCTGTGGTGAGAATTGTTCGGATGAAGAACAAGCGAAGAAGATTGCGAAGATGCTGGACGATTCAGCATCTGTGATTATATTGGGAGATATCGTATTCCTCAGGCCTGAACAGGTAGCAAAGACCATCCAGGCTCTACTCCCTATGCCAGGGGCCAAGGGGAAAGAGTCAGAAAGAAAAGAACTTGAAGAAATGGAAAAAGAGAAGGCAGCCATTGACAACAGAGCTGACACCTTGGTTCGGCGTGAGCTTTGGGCCGGGCTGGGCTTTCTTGTGGTTCAAACAGCAGCGTTCATGAGGCTCACATTTTGGGAACTTTCGTGGGATGTAATGGAGCCCATATGCTTCTATGTGACCTCTATGTACTTCATGGCTGGCTACACATTCTTCCTTAGGACCTCGAAAGAGCCTTGTTTTGAAGGTTTCTACCAAAGCCGTTTCAGCACCAAGCAGAAGCGCCTAATGAAACTTCACAATTTTGACATTGCAAGGTATAATGAACTCAGGGCTGCTGCAACATTGGCACCCTCTTCCGAATTGGATTCATCCGTTGATCACAAATTTCACAATAATTTGTAG 987 0.4975 MAFKKTLAQRLLSITKISNCRISSSSSFQSRIASTAGKPDIAPDPGDNGIFRRFLHKRPFFSPELRPPAANNLLLMLREMDIARSRIRLDGLTPPEKEGMAVEDVRKLLRATQLETVKLKLRKVPESCIAYSEFIRICGENCSDEEQAKKIAKMLDDSASVIILGDIVFLRPEQVAKTIQALLPMPGAKGKESERKELEEMEKEKAAIDNRADTLVRRELWAGLGFLVVQTAAFMRLTFWELSWDVMEPICFYVTSMYFMAGYTFFLRTSKEPCFEGFYQSRFSTKQKRLMKLHNFDIARYNELRAAATLAPSSELDSSVDHKFHNNL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0253 328 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 314 - -
Apr3g0253 328 Pfam Mitochondrial calcium uniporter 145 304 IPR006769 -
Apr3g0253 328 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 314 IPR039055 GO:0051560
Apr3g0253 328 Coils Coil 191 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0253 Apr-Chr3 4743814 4748160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0253 K20858 - gmx:100785566 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0253 3 4743814 4748160 Apr3g0253 3 4743814 4748160 ECH
Apr3g0253 3 4743814 4748160 Apr7g0987 7 16904226 16906568 ECH