Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0236 ATGGCGGAAATTAGGCTTACAAGGGCAGAGCGAGGCCAAACAAAGGTTAAGAATGTTCCGATAGCTGTCACCCCAGAAGGATTTTGGTGTTGCCCTTCTCCTGTTGTGTTTCAGAAAAGCCTTAAGGCTCAAAATCCTCTAAATAAGCCCAAACCCTCTTCACCCCCACCAAAAACTAGTGTCCAGAAAAAGCCAGTGCCTGTGGCAGTGAGTGAGAGAAGAGGTGCTGCACCTGCACCTGCACCTTCAAGATTGATGCTTTCTGATGATCAACAATGTGCTACTGCTCCAGAAAGACCGCCACCTACTACATCTGTGGCTGCAGAGAGACCCCCGAGACCCAAAATTGAAACTTTGCCGAAAAAGGTAGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTTTATTAGGAAAGCAGGGTTTCTCTGTCAAGTTGAGTGTGCACAAGGATGTTCTGACTGAGAAGAGTAGTTTCTTTTCTGAAAAACTCTCTGAACAGTCGAGTTTAACATGTCTCCAAATTGGTGATTGTGAGGATGTTGAGATATATATTGAAACTGTTGGTTTGATGTACTGTAAGGAGATGAAGCAGCGGCTTATGAAGCAAAGTGTATCTCGCATTCTTCGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGGTTGGAGAGGAAGAAGAAGAAAAGGTGGTCTCAACTGTCCTTCAACTCCAAGCTGAAGGAATTGGGGTCAACCCTGTACTAAAACGAGTTTCTTCTGACATTTCTAATGTCCCAAAAGACACTCTTTCCCACATCATTGAACTTGTTCTCAAAAGCAATGAGGAAAGAGGTCGCCGAGAGATGAAATTGATAGTCCTAAAGCTCCTCAGGGAGAATAACAGACTTCCAAGCTATGCACGTTCATCTGACATCTGCAATGACAGGATTTATAGATCATGCAAAACCTGCTTGGATTCGTTATTGTCACTGTTCAAGAAGGCTGCAGAACCGGCCTTTGCAGACAAACCAAGTGATGACCGGGACCACGTGACCAAGCATATAGCTCTTGAAGCCGATAACCTGTCATGGTTGCTTGAGATCTTAATTGACAAACAAGCGGCCGATGAGTTTGCACTGATGTGGGCAAACCAGCAGGAATTGGCTTTTTTACACGAAAAGCTGCCAATTGTGTCGCGTTATCACGTTAGCTGCATTTCTGGAAGACTATATGTTGGCATTGGAAGAGGGGAGCTGTTGCCATCAAAGGACACACGCCAGTTGTTGTTACAGACATGGCTCCAGCCTCTAATGAACGACTATAACTGGTTACAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAAGAAGGAATTGGGAGGACTATTCTCACCTTGCCTCTTGAGGATCAACAAAGTATTTTGCTTTCATGGTTGGGGAGTTTCTTGAAAACTGGTGATAGTTGTCCTAATCTTCAGAGAGCTTTTGAGGTCTGGTGGAGGAGAACTTTCATTAGACCTTATGTGGAAAACCAAGGTAATGTTGCTGTGTCAGATAGTTCAATTTCAATGCTGCCAAAGCAGCACGAATGA 1629 0.4438 MAEIRLTRAERGQTKVKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPLNKPKPSSPPPKTSVQKKPVPVAVSERRGAAPAPAPSRLMLSDDQQCATAPERPPPTTSVAAERPPRPKIETLPKKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHKDVLTEKSSFFSEKLSEQSSLTCLQIGDCEDVEIYIETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEEEKVVSTVLQLQAEGIGVNPVLKRVSSDISNVPKDTLSHIIELVLKSNEERGRREMKLIVLKLLRENNRLPSYARSSDICNDRIYRSCKTCLDSLLSLFKKAAEPAFADKPSDDRDHVTKHIALEADNLSWLLEILIDKQAADEFALMWANQQELAFLHEKLPIVSRYHVSCISGRLYVGIGRGELLPSKDTRQLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNVAVSDSSISMLPKQHE* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0236 542 Gene3D Potassium Channel Kv1.1; Chain A 127 258 IPR011333 -
Apr3g0236 542 PANTHER BTB/POZ DOMAIN PROTEIN 1 528 - -
Apr3g0236 542 ProSiteProfiles BTB domain profile. 133 203 IPR000210 GO:0005515
Apr3g0236 542 MobiDBLite consensus disorder prediction 43 113 - -
Apr3g0236 542 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 528 IPR038920 -
Apr3g0236 542 SUPERFAMILY POZ domain 132 235 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0236 Apr-Chr3 4286872 4292966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0236 - - gmx:100789609 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0236 3 4286872 4292966 Apr3g0236 3 4286872 4292966 ECH
Apr7g0968 7 16690661 16694583 Apr3g0236 3 4286872 4292966 PCT