Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0215 ATGCATCAAGCTTCCCTCTGTGCTGTCTCAAATTCAACAGCTAATCTTCCATCAATGTCAAACCGCACCCATTTCAAGCTTAGACAGTTCAATCGAATTAGGAGCCAGTCTCACATGAGTATTACCCCAACACAGCATAGGTGGACTCTTCAGGACATGACAGCTCTTGTCACTGGTGGGACTCGCGGAATTGGGCACGCCATTGTGGAGGAATTGACGGGGTTTGGGGCCAAAGTGCATACATGTGCCAGGAATGAAGAAGATCTCAGTAAGTGCCTCAAGGAATGGAATGATTCGGGTTTTGAGGTTACTGGCTCTGTTTGTGATGTCTCGGTTCCTGTACAGAGGGAGGCTCTGATGGAAGCTGTTTCCTCTGTCTTCCAGGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAGTGACAGACTTCACAAGTACAGAGTTTTCCAGTCTCATTGATACCAATTTAGGATCCACCTTTCATATATGCCAACTTGCATATCCACTTTTGAAAGCATCGGGAATGGGGAGTGTTGTGTTTATCTCCTCTGTTTCTGGTTTTGTCTCACTCAAGTCCATGTCTGTTCAAGGAGCAACGAAAGGGGCAATTAATCAACTTACAAAAAATCTAGCTTGTGAATGGGCAAAAGACAATATACGAAGTAATGCAGTTGCACCTTGGTACATCAGAACTTCAATGGTAGAGAAGGTGCTCAGCAACAAAGACTATCTCGAAGAAGTATATTCTAGAACTCCTCTTAGGCGCCTAGGAGATCCAGCAGAAGTCTCTTCTGTTGTTGCCTTTCTTTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGCATTGATGGAGGAATGTCTGTGAATGGTTTCTACCCAACACAGATCTAA 915 0.4415 MHQASLCAVSNSTANLPSMSNRTHFKLRQFNRIRSQSHMSITPTQHRWTLQDMTALVTGGTRGIGHAIVEELTGFGAKVHTCARNEEDLSKCLKEWNDSGFEVTGSVCDVSVPVQREALMEAVSSVFQGKLNILINNVGTNIRKPVTDFTSTEFSSLIDTNLGSTFHICQLAYPLLKASGMGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKNLACEWAKDNIRSNAVAPWYIRTSMVEKVLSNKDYLEEVYSRTPLRRLGDPAEVSSVVAFLCLPASSYITGQIICIDGGMSVNGFYPTQI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0215 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 140 IPR002347 -
Apr3g0215 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 190 IPR002347 -
Apr3g0215 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 54 71 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 129 140 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 176 192 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Apr3g0215 304 PRINTS Glucose/ribitol dehydrogenase family signature 258 278 IPR002347 -
Apr3g0215 304 PANTHER TROPINONE REDUCTASE 28 303 IPR045000 GO:0016491
Apr3g0215 304 Gene3D - 43 298 - -
Apr3g0215 304 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 28 303 - -
Apr3g0215 304 Pfam Enoyl-(Acyl carrier protein) reductase 61 295 - -
Apr3g0215 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 297 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0215 Apr-Chr3 3856747 3859358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0215 47 299 Miscellaneous Gene Families AT2G29290 62.055 1.06e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0215 K08081 - gmx:100799534 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0215 3 3856747 3859358 Apr3g0215 3 3856747 3859358 ECH