Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0011 ATGGCACTTCCCCTTCTTCGAATTCCAGGTACATGCTGCATTCCACTCAAGAAGCAATCTTTCCCTTCCAATAGCCGCCGCAAAACGACTTCTGCGACGGCGGAGCTCCAAACGCCTGTGGTTCGGACGGGGGGAACTGGTTACCAGTCTCCGTCTGTTAATGTTCCAACCCACAAGGTCACGGTCCACGACAGACAACGAGGTGTCGTTCACGAGTTCCTCGTACCCGAGGACCAGTATATATTGCATACTGCTGAGTCCCAGAATATTACCCTTCCATTCGCTTGCAGGCATGGTTGTTGTACTAGCTGTGCTGTACGTATAAAGAATGGACAGATTAGACAGCCAGAGGCACTTGGGATATCTGCTGAATTGAAAGAGAAGGGTTATGCACTACTTTGTGTGGGCTTCCCATCCTCTGATGTTGAAGTAGAAACTCAAGATGAAGATGAGGTATATTGGCTTCAATTTGGACGCTATTTTGCCCGAGGACCAGTGGAAAGAGATGACTATGCCTTGGAGTTGGCCATGGCTGACGAATAA 543 0.4899 MALPLLRIPGTCCIPLKKQSFPSNSRRKTTSATAELQTPVVRTGGTGYQSPSVNVPTHKVTVHDRQRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKNGQIRQPEALGISAELKEKGYALLCVGFPSSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMADE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0011 180 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 58 150 IPR001041 GO:0051536
Apr3g0011 180 CDD fer2 60 145 IPR001041 GO:0051536
Apr3g0011 180 Pfam 2Fe-2S iron-sulfur cluster binding domain 68 136 IPR001041 GO:0051536
Apr3g0011 180 PANTHER FERREDOXIN 24 165 - -
Apr3g0011 180 PANTHER FERREDOXIN C 2, CHLOROPLASTIC 24 165 - -
Apr3g0011 180 SUPERFAMILY 2Fe-2S ferredoxin-like 51 158 IPR036010 GO:0051536
Apr3g0011 180 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 58 153 IPR010241 GO:0009055|GO:0022900|GO:0051537
Apr3g0011 180 Gene3D - 55 160 IPR012675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0011 K02639 - gmx:100782906 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0011 3 171055 179675 Apr3g0011 3 171055 179675 ECH