Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2615 ATGGACACCAATAATTGGAGACCTAATCAAGGAACTGAACCTAATATGGATAATGGTGATTGGAGAGGTCAACTCCAGCCTGATTCACGCCAACGAATTGTCAACAAAATAATGGACACTTTAAAAAGACATCTTCCACTTTCTGGTCAAGAGGGGTTGCATGAACTTAGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCAGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGACAAAATCCCAGGGCACCATGGCCAACAACATACCTCCAAATCAAGGTGGTCCTAGCAATAAACCTCCTGATCCAGGACTTGTTATGCCTCAAGTTCACAATCCCGGGCAGCAACATGCTATTTCTTTGCCCAATCAACCTCAGTCACGCCAACAGCTTCTATCTCAGAACATTCAAAATAATATTGCATCTCAACCTAACTTGCCACCTGTATCAAGTCTAGCCCAGACTCCTATACAAAATGTTGGCCAGAATCCAAACATGCAGAATATACCTGGACAGAATACAATGGGTAGCACTATTGGCCAGAATTCCAACATGCAAAATATGTTTGCTAGTTCCCAGAGACAAATGCAAGGAAGGCAGCAGGTTGTTCCCCAGCAGCAACAGCAGCAATCACAAAATCCACAGCAGTATCTGTACCAACAACAAATTCAACATCAGCTTTTGAGGCAGAAGCTTCAGCAGCAGCAGCAGCAACAGCAGCAGCAGAATCTTCTACAATCAAATCAGCTGCAATCTTCTCAGCAGCCTGTCATCCAAACATCATCTGTTATGCAGCAGCCTTCCATGATGCAAACATCTTCTCTACCTAGCATTCAGCACAATCAGCAATCTAATAATGTTCAGCAATCAACACAATCCATGCTTCAGCAACACCCCCAAGTTATCAGGCAACAGCAACAACAGACTTCTATCATTCATCAGCAACAAACACAAATGACTCAACAGTCAATATTACCTCCACAGCAGCAGCAGCAGCAACAGCTTATGGGGTCACAGGCAAATGCGACAAACATGCCACATACGCAGATGCTTGGGCCACAGACTAATGTTGGTGATCTGCAGCAACCACAGAGGTTACTTGCACAGCAGAATAATCTTTCAAGCCTGCAACAGCAACAGTTAATAAATCAGCAAAGCAACCTATCAAATATACACCAGCAGTTGGGCAATAATGTCCCTGGGTTACAGCCACAGCAGGTCCTTGGACCTCAATCTGGCAACTCTGGCATGCAAACAAGCCAGCACTCTGCACATGTGCTACAACAATCAAAGGTCTCAATTCAACAACAATCACAGCAGAATGCATCAAATTTGTTACCACCTCAAGCACAGCAGTCACAGCCACAGGCTCCACAGCAGCAAATGATGCCTCAGATTCAATCTCAGCCTGCACAATTGCAACAACAATTGGGTTTGCAACAGCAGCCTAATCCCTTGCAACGAGATATGCAGCAAAGACTTCAGCAGTCAGGTCCCTTACTTCAACAACCAAGTGTTCTTGATCAACAAAAGCAGTTATATCAATCACAAAGACCCCTTCCAGAAACTTCATCAACTTCTCTGGATTCAACTGCACAGACTGGACAGCCAAGTGGGGGTGATTGGCAAGAAGAAGTGTATCAAAAGATTAAATCCATGAAAGAAAGTTACTTGCCAGAGCTGAATGAGATGTACCATAAAATTGCTTCTAAACTTCAACAGCACGAGTCTCTTCCCCAACAACCAAAGTCAGATCAGCTTGAAAAACTGAAGGTATTTAAAATGATGCTGGAGCGTATTATAACATTCCTTCAGGTTTCCAAGAGCAACATCACAGCTAATTTCAAGGAGAAACTGGGTTCTTATGAGAAGCAGATCATAAATTTCATAAATACAAATAGACCTAGGAAAACCATGTCTTCACTGCAACCGGGACAGCTTCCCCCGCCTCATATGCACTCCATGTCACAGTCACAACCCCAAGTTACTCAAGTGCAGTCTCATGATAACCAAATGAACTCTCAGTTGCAAACAACAAATATGCAAGCCTCTGTAGCAACAATGCAGCAGAATAATATGACAAGCATGCAGCATAATTCTCTGTCTGCTGTATCTACGGGACAGCAGGGTATGATGAATTCAATGCAACCAAGTTCCAGTTTAGATTCAGGACAAGGAAATGCTGTGAACCTGCAACAGGTTCCGGTGAGCTCCCTTCAACAAAACCCTGTCAGTGCCCCTCAACAAACAAACGTTAACTCGTTATCTTCACAAGCTGGGGTAAATGTGATCCAACCAAATCTTAATCCCCTGCAGCCTGGTTCTAGTATGCTTCAACACCAGCAACTTAAACAACAGCAGGAACAACAGATGTTACAAAGTCAACAACTAAAACAACAATATCAGCGGCAAATGATGCAGAGGAAGCAGCTCTTACCGCAGCAACAGCAGCAACAGCCACAGCAGCTGCACCAGCCACCAAAGCAGCAGCTGCCTACACAATTGCAGACACATCAAATGCCTCAACTTCACCAAATGAATGATGCAAATGACATAAAGATGAGGCAAGGAATTGGTGTTAAGCCAGGGGTCTTTCAGCAGCATCTTACTTCCAGTCAACGGTCATCTTATCCCCATCAACAGTTGAAACAAGGGAGTCCTTTCCCTGTTTCTTCACCCCAACTCCTTCAAGCTACTTCTCCTCAGATTCCACAACATTCATCTCCCCAGGTTGACCAACAAAACCACCTTCCATCTCTAACAAAAGTTGCTACCCCTCTGCAACCTGCTAACTCACCTTTTGTAGTCCCAACTCCTTCTCCTCCCTTGGCTCCATCTCCTATGCCAGGAGAGTCGGAAAAGCCCATTTCTGGTGTTTCATCTCTCTCAAATGCTGCAACTATTGGATATCAGCAAACAGCTGGTGCAGCAGCACCTGCTCAATCCCTTGCCATTGGAACTCCTGGAATATCAGCCTCTCCTTTACTTGCAGAGTTCACTGGTTCAGATGGTGCTCATGGTAATGTTCTAGCTCCCACTTCTGGAAAGTCAACTGTTACTGAGCAGCCTATTGAGCGCCTAATTAAAGTGGTGAAATCAATGTCTTCAAAAGCATTAAATTCTGCTGTCAGTGATATTGGTTCAGTTGTCAGCATGAACGATAGGATAGCAGGTTCTGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAAGATTTGGTTGCCATGACTAATTGTCGTCTTCAGGCTAGAAATTTCATCACCCAAGATGGTGCCAATGGAACTAGGAGGATGAAACGCTACACAAATGCTACTCCCTTGAATGTTGTGTCTTCTGCTGGTAGCATGAATGACAGTATCAAGCAATTAACTGCTTCTGAGGCTTCTGATTTGGATTCAACTGCAACATCTAGAATCAAGAGGCCGAGGATTGAGGCTAATCATTCCCTTTTGGAGGAAATTAGGGAGGTCAATCAACGACTTATTGACACAGTAGTAGACATAAGTGATGAAGAAGTGGATCCAACGGCAGCTGCTGCTGCTGCTGAAGGGACAGAAGGGACCATTGTCAAATGTTCTTTCAGTGCTGTGGCCCTCAGTCCGAGCTTAAAATCCCAATATGCTTCAGCACAGATGTCACCGATTCAGCCCCTACGCTTGCTTGTTCCTACAAATTATCCTAATTGTTCTCCCATACTCCTCGACAAGTTCCCTGTTGAATCCAGCAAGGAGAATGAAGATCTTTCGGTGAAAGCAAAGTCAAGGTTTAGCATATGCTTGCGAAGTCTATCACAACCTATGTCTCTTGGGGAGATAGCGAGGACTTGGGATGTTTGTGCTCGTACAGTTATTTCTGAGCATGCGCAGCAGAGCGGCGGTGGGAGTTTCAGCTCTAAATATGGAACCTGGGAGAATTGCTTGACCACATGA 3963 0.4441 MDTNNWRPNQGTEPNMDNGDWRGQLQPDSRQRIVNKIMDTLKRHLPLSGQEGLHELRKIAQRFEEKIFTAATSQSDYLRKISLKMLTMETKSQGTMANNIPPNQGGPSNKPPDPGLVMPQVHNPGQQHAISLPNQPQSRQQLLSQNIQNNIASQPNLPPVSSLAQTPIQNVGQNPNMQNIPGQNTMGSTIGQNSNMQNMFASSQRQMQGRQQVVPQQQQQQSQNPQQYLYQQQIQHQLLRQKLQQQQQQQQQQNLLQSNQLQSSQQPVIQTSSVMQQPSMMQTSSLPSIQHNQQSNNVQQSTQSMLQQHPQVIRQQQQQTSIIHQQQTQMTQQSILPPQQQQQQQLMGSQANATNMPHTQMLGPQTNVGDLQQPQRLLAQQNNLSSLQQQQLINQQSNLSNIHQQLGNNVPGLQPQQVLGPQSGNSGMQTSQHSAHVLQQSKVSIQQQSQQNASNLLPPQAQQSQPQAPQQQMMPQIQSQPAQLQQQLGLQQQPNPLQRDMQQRLQQSGPLLQQPSVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQPSGGDWQEEVYQKIKSMKESYLPELNEMYHKIASKLQQHESLPQQPKSDQLEKLKVFKMMLERIITFLQVSKSNITANFKEKLGSYEKQIINFINTNRPRKTMSSLQPGQLPPPHMHSMSQSQPQVTQVQSHDNQMNSQLQTTNMQASVATMQQNNMTSMQHNSLSAVSTGQQGMMNSMQPSSSLDSGQGNAVNLQQVPVSSLQQNPVSAPQQTNVNSLSSQAGVNVIQPNLNPLQPGSSMLQHQQLKQQQEQQMLQSQQLKQQYQRQMMQRKQLLPQQQQQQPQQLHQPPKQQLPTQLQTHQMPQLHQMNDANDIKMRQGIGVKPGVFQQHLTSSQRSSYPHQQLKQGSPFPVSSPQLLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQPANSPFVVPTPSPPLAPSPMPGESEKPISGVSSLSNAATIGYQQTAGAAAPAQSLAIGTPGISASPLLAEFTGSDGAHGNVLAPTSGKSTVTEQPIERLIKVVKSMSSKALNSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTNATPLNVVSSAGSMNDSIKQLTASEASDLDSTATSRIKRPRIEANHSLLEEIREVNQRLIDTVVDISDEEVDPTAAAAAAEGTEGTIVKCSFSAVALSPSLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVESSKENEDLSVKAKSRFSICLRSLSQPMSLGEIARTWDVCARTVISEHAQQSGGGSFSSKYGTWENCLTT* 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2615 1320 MobiDBLite consensus disorder prediction 1 25 - -
Apr2g2615 1320 Coils Coil 791 815 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 645 682 - -
Apr2g2615 1320 Gene3D Coactivator CBP, KIX domain 20 99 IPR036529 GO:0003712|GO:0006355
Apr2g2615 1320 MobiDBLite consensus disorder prediction 943 960 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 525 553 - -
Apr2g2615 1320 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 859 1320 IPR044661 GO:0003713|GO:0031490
Apr2g2615 1320 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 748 IPR044661 GO:0003713|GO:0031490
Apr2g2615 1320 MobiDBLite consensus disorder prediction 707 737 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 267 303 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 775 850 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 880 939 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 404 489 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 95 225 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 124 225 - -
Apr2g2615 1320 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 748 - -
Apr2g2615 1320 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 859 1320 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 880 969 - -
Apr2g2615 1320 Pfam KIX domain 19 98 IPR036546 -
Apr2g2615 1320 Coils Coil 229 249 - -
Apr2g2615 1320 MobiDBLite consensus disorder prediction 525 552 - -
Apr2g2615 1320 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 92 IPR036529 GO:0003712|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2615 K14972 - gmx:100783762 1786.16