Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2609 ATGTTAGAAGGCTACTACTGTGACATGTTTCCTCTTTGCAGAGGATTTTACCGAACATGTTGCAAAAGAGGGAGTTTTAAACGGTTCAGACGTTGGAGGATACCTTGTCATTTAGCAAACGGACAAGAATGTTCATCCTTGTTGAATTTGTGCATCCACCGAATCACTCAGGACATTGGTGAATTTAACACATTTTCTGCACTCCCAAGGGACTTGAGTCAGCGAATTTTCAACAATTTCGTTTGCTCTTGCCGTCTCACACCCGCTTCCCTCCAAGCCTTTCGAGATTGTGACCTCAATGATATTTACTTGGGAGAATATGGTGGTCTTGCTGTCAGTGATGGTTGGATGGATGTCATCTCATCACAGGGATCATCTTTGCTTCATCTGGATCTTTCTGGCTCTGATGTCACTGATCATGGCCTCACCTATCTTAGAGACTGCAAAAATATCATCTCTTTAAATCTTAATCACTGTCATCAAATTTCAGATCGTGGGTTGGAGTTCATCAGTGGTCTCTCAAACTTAACGAGTTTGAGTTTTAGAAGAAACAATGCAATATCTGCTCAGGGATTGAGTACATTTCCTGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCTTGCGATTCATGGAGGCGTTGTGCATCTTCAAGGTCTAACCAGGTTGGAATCTCTCAATATGAAGTGGTGTAATTGCATAGAAGATGCTGATATCGAGCCTCTATCAGCGCTTACAAACTTGAAAAGCCTAGAGATTTCCTTTAGTAAAGTCACAGATGTTGGCATCAGTTTTCTAAAAGGATTAAAAAAGCTTGCTTTGTTAAATTTGGAAGGATGCCATGTAACAGCTGCATGCTTGGATTTTCTTGCAGAGCTTCCTGCGCTGTCACACTTGAATCTTAGCAGATGTGATTTTTCTAACAATGGATGTGAAAAGTTTTCGCCATTTTTTTTTTCAGGACTGGAAAATTTGAATGTATTAAACTTGGGATTTAATTACATAACAGATGCATGTTTAGTTCACTTGAAAGGATTGACAAAGTTGAAGAGTTTGAACCTGGATTCATGTACGATTTATGATGAAGGATTGATCCACCTGGCGGGCCATCAGCAACTGAAATGCTTGGAACTCTCTGATACAGAAATTGGAAGCAATGGACTACACCATTTATCAGGATTGTCTAGTCTGGAGAAAATAAATCTATCATTCACTATGGTTAATGATAGTGGTTTAAGCAAACTGTGTGGCCTGTCATCTCTTAAGTCACTAAATTTGGATGCCCCCCAAATTACTGATACTGGATTGGCATCCTTAACAAGTTTGACTGGGCTTACAGACCTGGACTTGTTTGGTGCACGAATAACAGATTCTGGAACAAACTATTTAAAACACTTCAAGAACCTGAGGTTGCTGGAAATATGCGGTGGAGGGTTAACTGATGATGGTGTGAAAAATATCAAAGAGCTTTCATCTTTGACTTGCTTAAATTTATCACAAAACTGCAGCCTTACAGACACTACCCTGGAGTTAATTTCTGGGCTTACTGGTTTGATTTCTTTGAATGTTTCAAATTCTGGTATAACCATTGATGGGCTGCGGCATTTGAAAAGACTAGAGAACTTAAGGTCTCTTTCATTGGAGTCCTGTAAAGTGACAGCAAATGACATTAAGAAACTTCAATCAACACACCTCCCGAATCTTGCAAGCTTTCGACCCCAGTAA 1731 0.3986 MLEGYYCDMFPLCRGFYRTCCKRGSFKRFRRWRIPCHLANGQECSSLLNLCIHRITQDIGEFNTFSALPRDLSQRIFNNFVCSCRLTPASLQAFRDCDLNDIYLGEYGGLAVSDGWMDVISSQGSSLLHLDLSGSDVTDHGLTYLRDCKNIISLNLNHCHQISDRGLEFISGLSNLTSLSFRRNNAISAQGLSTFPGLVNLVKLDLERCLAIHGGVVHLQGLTRLESLNMKWCNCIEDADIEPLSALTNLKSLEISFSKVTDVGISFLKGLKKLALLNLEGCHVTAACLDFLAELPALSHLNLSRCDFSNNGCEKFSPFFFSGLENLNVLNLGFNYITDACLVHLKGLTKLKSLNLDSCTIYDEGLIHLAGHQQLKCLELSDTEIGSNGLHHLSGLSSLEKINLSFTMVNDSGLSKLCGLSSLKSLNLDAPQITDTGLASLTSLTGLTDLDLFGARITDSGTNYLKHFKNLRLLEICGGGLTDDGVKNIKELSSLTCLNLSQNCSLTDTTLELISGLTGLISLNVSNSGITIDGLRHLKRLENLRSLSLESCKVTANDIKKLQSTHLPNLASFRPQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2609 576 SUPERFAMILY RNI-like 124 443 - -
Apr2g2609 576 Gene3D Ribonuclease Inhibitor 479 572 IPR032675 -
Apr2g2609 576 Gene3D Ribonuclease Inhibitor 100 213 IPR032675 -
Apr2g2609 576 Gene3D Ribonuclease Inhibitor 214 287 IPR032675 -
Apr2g2609 576 Gene3D Ribonuclease Inhibitor 399 478 IPR032675 -
Apr2g2609 576 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 42 533 - -
Apr2g2609 576 PANTHER UNCHARACTERIZED 42 533 - -
Apr2g2609 576 Gene3D Ribonuclease Inhibitor 292 396 IPR032675 -
Apr2g2609 576 SUPERFAMILY L domain-like 392 570 - -
Apr2g2609 576 Pfam Leucine rich repeat 309 360 IPR001611 GO:0005515
Apr2g2609 576 Pfam Leucine Rich repeat 223 245 IPR001611 GO:0005515
Apr2g2609 576 Pfam Leucine Rich repeat 126 145 IPR001611 GO:0005515
Apr2g2609 576 Pfam Leucine Rich repeat 148 170 IPR001611 GO:0005515
Apr2g2609 576 Pfam Leucine Rich repeat 247 268 IPR001611 GO:0005515
Apr2g2609 576 SMART LRR_CC_2 222 247 IPR006553 -
Apr2g2609 576 SMART LRR_CC_2 420 444 IPR006553 -
Apr2g2609 576 SMART LRR_CC_2 348 372 IPR006553 -
Apr2g2609 576 SMART LRR_CC_2 148 173 IPR006553 -
Apr2g2609 576 SMART LRR_CC_2 541 565 IPR006553 -
Apr2g2609 576 SMART LRR_CC_2 295 319 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2609 Apr-Chr2 30006201 30014883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2609 395 544 Receptor kinase-like Gene Family AT1G29750 31.579 9.53e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2609 - - gmx:100795219 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2609 2 30006201 30014883 Apr2g2609 2 30006201 30014883 ECH