Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2603 ATGGTGTTTGATATCACTGATTCGGGAACTCAACAAAATACCAGGAGGAGAAAGAAATCTATCGTCTGGGAACACTTCACTGTGAAAACTGATGGACCTGGATGTGCCAAGGCTTACTGTAAAAGGTGCAAAAGATCATTTGCTTATCTAAAAGATTCAAAACAAGCTGGCACCAGCCATCTCAAGAGACACATTTCTCTAGGAATCTGTCAGAAAAGTCAGCAAACCCCATGTTCCAAAATTGATGCCAATCCACCAAAGAAACAAGCAAGAGCAAAACCTTGCTTTGCTGCTATCTCATTTGATCAGGCGAGTTGTAACAATAAGATTGCTAAAATGATTATTTTACATGATTATCCACTTCATATCGTGGAACACCAAGGTTTCATTAATTTTGTGCGGACACTTCAACCCCAGTTCAATCCACTGAGCTTTAATACTGTCCAAGAGGATTGTGTTGCTATGTTCCTCAGAGAGAAGCAAAACGTATTGAATCTTATCAATGGGATTCCTGGACAAGTCAACCTTACCTTGGACTTATGGACTTCAAACCAAACATCAGCCTATGTTTTTCTTCGAGGACATTTCATTGATGGTGATTGGAACTTACATCATCCCATTCTTAATGTATTGATGGTCCCATTCCCAGATTCTGATGGTTCCTTAAATCAAAATATAGTGAACTGCCTAAGTGATTGGCATTTAGAGGGCCGGCTATTTACCCTTGCACTTGATAAATTCTTCTTTAATGAGGCTTTGATGGGAAATCTGAGATGTCTCCTCTCTATTAAGAACCCTGTGATCCTCAATGGTCAGTTATTAAGCCAGAACTGTTATGCTCGTGTCCTTAGTCGCCTTGCATTAGATGCACTTTCTGCTATGAGAGAAACTGTTGATAAGGTTCGAGTGAGTGTGAAGTACATGAAATCTTCTAAATTTAATGAAGGGAAGTTTCTTGAGCTGAGGCAGCAACTTCAAGTCTCTAATACAATGGACCTTTTAATTGATGACCAAAATAAATGGGACACAATTTACCATATGCTTGCTGCTGCCTGTGAACTGAAGGAAGTGTTTGCATGCTTTGATGCGTCTGATCCTGATTACAGAGTGACTCTGACAATGGATGACTGGAAGCAGGTGGAAACTCTTTGCACATATTTGAAGTACTTGTATGATGCAGCAAACATTTTAACTGTCCAAGCATATCCAACTGCAAACTTATTTTTCCCTGAAGTGTCAAAACTCCAGGTGGAGTTGACTCGTGCTGCCTTCAGCCAGGATCCTTTCTGTAGTCGTTTGATTATGCCTTTGCAAGAAAAGTTTGATCAATATTGGAGAGAGAGCTGCTTCATTTTGGCTGTTGCTGTAGTCATGGATCCGAGGTATAAAATGAAACTTGTGAAATCCACCTTTGCTAAGATATTTGGTGAGAATGCTGATGAATGGATTAGAATTGTTGAGGATGGTCTCAATGAACTATTCCTTGAATATAATATCATACAAGTGCTTCCTTTTACAACAACAAATGGTCACGAAGGAAATGAGGCTATGATTAAGACTGAGCCATTTCAAGAAGTGTCACTTGATGGATCTCTTTTTACTTCTGAAGATGGACTTTCTGATTTTGAATTTTATATATCTGACTTTACGTGTAACCAGCAATTTAAGTCGGAACTAGATGAGTATCTTGAAGAGCCTCTAGAGCCCAGAGTACAAGAATTTAATATTCTGAGCTGGTGGAGAATAAACGGATTGAAATACCCAACATTGTCTAGACTAGCATCTGATATTTTGTCTATGCCTGCATCCACTCTCTCTGCAGATTCTGTTTTTGATATGGATATTAAAAAAATGGATAGCTACCGGAGTTCATTAGACTCTTTGACACTTGAGGCCCTGATTTGTACCAAGGACTGGTTCCAGTATAAATCATTACCCGGCAATGTTTCGAATGCACTAGTGAAAGTTGAGCATTAG 1977 0.392 MVFDITDSGTQQNTRRRKKSIVWEHFTVKTDGPGCAKAYCKRCKRSFAYLKDSKQAGTSHLKRHISLGICQKSQQTPCSKIDANPPKKQARAKPCFAAISFDQASCNNKIAKMIILHDYPLHIVEHQGFINFVRTLQPQFNPLSFNTVQEDCVAMFLREKQNVLNLINGIPGQVNLTLDLWTSNQTSAYVFLRGHFIDGDWNLHHPILNVLMVPFPDSDGSLNQNIVNCLSDWHLEGRLFTLALDKFFFNEALMGNLRCLLSIKNPVILNGQLLSQNCYARVLSRLALDALSAMRETVDKVRVSVKYMKSSKFNEGKFLELRQQLQVSNTMDLLIDDQNKWDTIYHMLAAACELKEVFACFDASDPDYRVTLTMDDWKQVETLCTYLKYLYDAANILTVQAYPTANLFFPEVSKLQVELTRAAFSQDPFCSRLIMPLQEKFDQYWRESCFILAVAVVMDPRYKMKLVKSTFAKIFGENADEWIRIVEDGLNELFLEYNIIQVLPFTTTNGHEGNEAMIKTEPFQEVSLDGSLFTSEDGLSDFEFYISDFTCNQQFKSELDEYLEEPLEPRVQEFNILSWWRINGLKYPTLSRLASDILSMPASTLSADSVFDMDIKKMDSYRSSLDSLTLEALICTKDWFQYKSLPGNVSNALVKVEH* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2603 658 SMART bed5 17 73 - -
Apr2g2603 658 SUPERFAMILY beta-beta-alpha zinc fingers 20 67 IPR036236 -
Apr2g2603 658 ProSiteProfiles Zinc finger BED-type profile. 17 77 IPR003656 GO:0003677
Apr2g2603 658 Pfam Domain of unknown function (DUF4413) 400 497 IPR025525 GO:0003677
Apr2g2603 658 SUPERFAMILY Ribonuclease H-like 171 642 IPR012337 -
Apr2g2603 658 PANTHER BED FINGER-RELATED 8 646 IPR045259 -
Apr2g2603 658 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 8 646 - -
Apr2g2603 658 Pfam hAT family C-terminal dimerisation region 558 640 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2603 Apr-Chr2 29972017 29975094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2603 - - gmx:106795554 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2603 2 29972017 29975094 Apr2g2603 2 29972017 29975094 ECH
Apr2g2603 2 29972017 29975094 Apr2g2603 2 29972017 29975094 PCT