Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2598 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCTCCTTCCCCCCCAGTTTCCAAGAGGCTCCGTTGTTCCTCCTCTCCTATTCGTCTTTCGATTTCAAACCTCATCGATCACCTTCGCCCTCTCTTTCCTCATATGGATGACCAGGTCCTTGAGAGAGCACTTCTAGAATGTGGCAACGACTTAGATGCCGCCATCAAGAGCCTGCACGGCCTCTGCTTGGGATCTGCCGATGATAATTCTGAAACTGCTCAACAATCTCAGCCTAACATCGACACAGGTACATTGGAAGATAATGGCGATGCTTCTGCTTCTGGGAATCAGTCAGCTTCCAACAATCTTCCTGCAGATGGAGCAGAATGGATTGACTTGTTCGTTAGAGAAATGACGTGTGCTACTAGTGTTGATGATGCCAGAGCTCGTGCTGCTAGATTGCTGGAGGTTCTAGAGAAATCGATCAGTGCACATGCAAGTTCTGGTGCAACAACTGCTCTTCAAAGGGAAAATTTGATGCTGAAGGAGCAAATTGAAGTGTTGACTAAGGAGAAAAATTGTTTTAAAAGTGCTTTTAGAATCCAGCTTGAACGTCTTTCTGATTATGAGGATAAAAACCAAGAGTTGCAACAGCTGAAGCAGTTGGTGTCACAATACCAGGAGCAGATCAGAACTCTTGAGGTGAATAACTACGCTTTGCGGATGCATCTGAATCAGGCACAACAGTACAACCCTTTTCCGGGGCGTTTCCCTCCTGATGCCTTCTAA 777 0.4646 MSAAVCGSKRSFFEDLPPSPPVSKRLRCSSSPIRLSISNLIDHLRPLFPHMDDQVLERALLECGNDLDAAIKSLHGLCLGSADDNSETAQQSQPNIDTGTLEDNGDASASGNQSASNNLPADGAEWIDLFVREMTCATSVDDARARAARLLEVLEKSISAHASSGATTALQRENLMLKEQIEVLTKEKNCFKSAFRIQLERLSDYEDKNQELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQQYNPFPGRFPPDAF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2598 258 Pfam CUE domain 39 73 IPR003892 GO:0043130
Apr2g2598 258 Coils Coil 195 232 - -
Apr2g2598 258 MobiDBLite consensus disorder prediction 84 117 - -
Apr2g2598 258 CDD CUE 38 74 - -
Apr2g2598 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Apr2g2598 258 Gene3D - 25 83 - -
Apr2g2598 258 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Apr2g2598 258 Coils Coil 167 187 - -
Apr2g2598 258 SUPERFAMILY UBA-like 36 81 IPR009060 GO:0005515
Apr2g2598 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2598 Apr-Chr2 29947193 29949455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2598 - - gmx:100815998 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2598 2 29947193 29949455 Apr2g2598 2 29947193 29949455 ECH
Apr2g2598 2 29947193 29949455 Apr2g2598 2 29947193 29949455 PCT