Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2590 ATGGAGAACGCGGCGACACAAAGTGCTTCCAAAGACGAGGTTTTGTCGGTCGAGCTTCCAGCTCCTCCTGGTTGGAACAAGCTGTTCTTCCCTAAGAAAGTGGGATCACCCAGAAAAAGTGAGATTGTATTTGTTGCTCCAACTGGGGGGGAGATCAGTACCAGAAAACAGTTGGAGCAGTACCTGAAGGCACATCCTGGCAACGCTGCAATATCAGAGTTTGACTGGGGAACTGGTGAGACCCCTAGGCGATCAGCAAGGATCAGTGAGAAGGCCAAATCAACCCCACCAGCAGATAGTGAACCTCCGAAAAAACGAGCTCGAAAATCATCAGGATCAAAGAAGGATAACAAAGAAACTGAATCTGCTTCAGAGGAAGGCAAAGCAAAGTCTGATACCGAGGATCTCAAGGCTGCAGAGGAAGATGGTAATAAAGGAAACGATAATTCTGAAGAAGAGCAACTTGAGAATGGAGATAAAACTCAACAAATTGAACAGACCAATAAGCCAGACGTAGATATGGAAGATGCTGCTCTGAATGATTCTGATAAGAAAATAAAGAATGATTCAGAGGAAGCTAATAATAGTCATGTGGAAAATGTGATTGCTGAAAAGCCCGACGGTGAAGAAGCTCAAAAGCAAGACAACATATCAGTAGCAGAATCAGCAGAGAAAGGTGCTGAAGAAGAATCCCAGGGGGGCCTACTGACCGAGTTAGAAAAAGAAAATGGTGCAGTCGACAAGAAACAGGATCAATCTGATGCTGTTATTGCAGATGCTAATGGGGGAGTTGAGAAAGAGAATCCCAACACTTTGCTGCCTGCATCTGTTGAAGAGACAAATCCTAAGCAAGTCCCAGTAACTGATGGTAAAAACACCATTCAAGCAGATGAACAAGTCACAAAAAATGATGTGGAGCTAGTTGACAATGGAAATGTTATTTGGAGCTGTGCTCAGTGA 960 0.4417 MENAATQSASKDEVLSVELPAPPGWNKLFFPKKVGSPRKSEIVFVAPTGGEISTRKQLEQYLKAHPGNAAISEFDWGTGETPRRSARISEKAKSTPPADSEPPKKRARKSSGSKKDNKETESASEEGKAKSDTEDLKAAEEDGNKGNDNSEEEQLENGDKTQQIEQTNKPDVDMEDAALNDSDKKIKNDSEEANNSHVENVIAEKPDGEEAQKQDNISVAESAEKGAEEESQGGLLTELEKENGAVDKKQDQSDAVIADANGGVEKENPNTLLPASVEETNPKQVPVTDGKNTIQADEQVTKNDVELVDNGNVIWSCAQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2590 319 MobiDBLite consensus disorder prediction 97 159 - -
Apr2g2590 319 MobiDBLite consensus disorder prediction 169 194 - -
Apr2g2590 319 MobiDBLite consensus disorder prediction 67 293 - -
Apr2g2590 319 Gene3D - 2 134 - -
Apr2g2590 319 SUPERFAMILY DNA-binding domain 5 105 IPR016177 GO:0003677
Apr2g2590 319 Pfam Methyl-CpG binding domain 18 80 IPR001739 GO:0003677
Apr2g2590 319 MobiDBLite consensus disorder prediction 273 293 - -
Apr2g2590 319 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 11 81 IPR001739 GO:0003677
Apr2g2590 319 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11 10 281 - -
Apr2g2590 319 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 10 281 IPR039622 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2590 Apr-Chr2 29902409 29905702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2590 - - aprc:113854037 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2590 2 29902409 29905702 Apr2g2590 2 29902409 29905702 ECH