Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2571 ATGGAAGTGATGCAGCGGGTGGCGTTACGGTTGCCTGTGGTTCCGATAGCTTTCCAATACGGTGTCGTAATGAGCAGTTACTGCACAACCGGAATGGGAGTGTTGAGGAAGAAGATGAGCTCAAGTTCAGGTTCAGGATCAGGATGGTTTGCGGGGAAATTGCCGAAAATAGTGAAAGCTGGAGAGCGTGTTCTTCACCAGCCTGCAGAAGAAGTTGTTGGGAGCGAGATGAAGTCTGAGAGAGTGCAGAAGATCATCGACCACATGATCCGTGTCATGAGAATCGCACCTGGAGTTGGCCTCGCTGCTCCGCAGATTGGAATCCCCTTAAGAATAATTGTTTTGGAAGATAGAAAAGAGTATATGAATTATGAAACAAAGGAAGAGATTAAAGCACAGGATAGAAGACCCTTTGATCTTTTGGTGATCCTGAATCCCAAGTTGAAGAAAAAGACTAATAGGACTGCCCTATTCTTTGAAGGCTGTTTGAGTGTTGATGGATATAGTGCTGTGGTAGAGCGGCACCTTGATGTTGAGGTTGCAGGTTTTGATCGTTGCGGGGAACCCATCAAACTAAATGCTAGTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACCTGGATGGAATACTGTATGTTGATAAGATGTTACCAAGAACTTTCAGAGCTGCACAAAACGTGGATTTGCCTCTTCCCTATGGGTGCCCCAAACTTGGCCCCCGCTAA 732 0.4645 MEVMQRVALRLPVVPIAFQYGVVMSSYCTTGMGVLRKKMSSSSGSGSGWFAGKLPKIVKAGERVLHQPAEEVVGSEMKSERVQKIIDHMIRVMRIAPGVGLAAPQIGIPLRIIVLEDRKEYMNYETKEEIKAQDRRPFDLLVILNPKLKKKTNRTALFFEGCLSVDGYSAVVERHLDVEVAGFDRCGEPIKLNASGWQARILQHECDHLDGILYVDKMLPRTFRAAQNVDLPLPYGCPKLGPR* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2571 243 Gene3D Peptide deformylase 53 239 IPR036821 -
Apr2g2571 243 PANTHER PEPTIDE DEFORMYLASE 33 243 IPR023635 GO:0042586
Apr2g2571 243 TIGRFAM pept_deformyl: peptide deformylase 56 220 IPR023635 GO:0042586
Apr2g2571 243 PRINTS Peptide deformylase signature 87 116 IPR023635 GO:0042586
Apr2g2571 243 PRINTS Peptide deformylase signature 160 171 IPR023635 GO:0042586
Apr2g2571 243 PRINTS Peptide deformylase signature 172 190 IPR023635 GO:0042586
Apr2g2571 243 PRINTS Peptide deformylase signature 191 220 IPR023635 GO:0042586
Apr2g2571 243 PANTHER PEPTIDE DEFORMYLASE 33 243 - -
Apr2g2571 243 SUPERFAMILY Peptide deformylase 54 226 IPR036821 -
Apr2g2571 243 Pfam Polypeptide deformylase 56 220 IPR023635 GO:0042586
Apr2g2571 243 CDD Pep_deformylase 57 214 IPR023635 GO:0042586
Apr2g2571 243 Hamap Peptide deformylase [def]. 53 229 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2571 Apr-Chr2 29792451 29793936 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2571 K01462 - gmx:100306710 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2571 2 29792451 29793936 Apr2g2571 2 29792451 29793936 ECH
Apr2g2571 2 29792451 29793936 Apr2g2571 2 29792451 29793936 PCT