Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2556 ATGTTGCGGAGACTCTTCTCTCCTTCTCACCTCAGATCCCTACCCACCGCACTCTCTCCTTCTCTTCCCCGATTCGCCGCTCCTCTCCTCACGCGCCACGTCACTGCCCAATCAGGTTCTTCTATCAGAAAGAGAGTTGAGGATGTAGTGCCAATTGCTACTGGCCACGAGCGTGAGGAGATTCAGGCTGAGCTTGAGGGAAGGGATATTCTTGAAATAAACCATCCCATTGGTCCTTTCGGCACAAAGGAAGCACCTGCTGTTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGATGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGTTGGAGAAAGGCAAGCAGATTGAATGTCCAGTGTGCTCACAGTATTTTGTGCTGGATGTGGTCGGACCCGGCGGTGATCCTTATGGACATGGCGATCACGATCACCATTGA 456 0.5044 MLRRLFSPSHLRSLPTALSPSLPRFAAPLLTRHVTAQSGSSIRKRVEDVVPIATGHEREEIQAELEGRDILEINHPIGPFGTKEAPAVVKSYFDRRIVGCPGCEGEDEHDVVWFWLEKGKQIECPVCSQYFVLDVVGPGGDPYGHGDHDHH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2556 151 CDD Cyt_c_Oxidase_Vb 44 138 IPR002124 GO:0005740|GO:0005751|GO:0006123
Apr2g2556 151 Pfam Cytochrome c oxidase subunit Vb 53 141 IPR002124 GO:0005740|GO:0005751|GO:0006123
Apr2g2556 151 Gene3D Cytochrome c oxidase, subunit Vb 43 136 IPR036972 GO:0005740|GO:0005751|GO:0006123
Apr2g2556 151 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 151 - -
Apr2g2556 151 SUPERFAMILY Rubredoxin-like 43 139 - -
Apr2g2556 151 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 41 140 IPR002124 GO:0005740|GO:0005751|GO:0006123
Apr2g2556 151 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 151 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2556 K02265 - gmx:100801050 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2556 2 29724198 29726871 Apr2g2556 2 29724198 29726871 ECH
Apr2g2556 2 29724198 29726871 Apr2g2556 2 29724198 29726871 PCT