Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2546 ATGGAGGGAAGTGATGTATACAGAGCAAGTAATAGTTTAAGAGCAAGAAGTTCCACTGTTTGGAGAAACAGTGGTGTTGAGGTTTTCTCAAAGTCTTCTCGTGAAGAGGATGATGAAGAAGCTTTGAAATGGGCAGCACTTGAGAAGCTACCCACATACAACCGTCTCAAGAAAGGTTTGTTAACTGCATCACATGGAATCACCAATGAGATCGATGTCACTGATCTCGGTTTTCAAGAAAGACAGAAACTTCTTGAGAGGTTGGTCAAGGTTGCTGAAGAGGACAATGAGAAGTTCTTGTTGAAGCTCAAGGAGAGAATTGATAGAGTTGGGCTTGATATTCCAACAATTGAAGTTAGATATGAGCACCTGAATATTGAGGCAGAGGCATTTGTGGGAAGTAGAGCTTTGCCCAGTTTCATCAACTCTGTTACTAATGTCATAGAGGGACTTCTGAATTTGCTCCATATTATCCCAAGCAAAAAGAAACACGTCACTATTCTTAAAGATGTTAGTGGGATTGTTAAACCTCGGAGGATGACACTGCTTTTGGGTCCTCCCAGTTCAGGAAAGACTACACTCCTTTTAGCCTTGTCAGGAAAGCTTGATAAAAGTCTTCAGGTATCCGGGAGAGTGACTTACAATGGACATGGAATGAATGAGTTTGTACCCCAGAGAACTGCTGCGTATATTAGCCAGCATGATGTTCATATTGGAGAAATGACTGTGAGAGAAACCTTGGCTTTCTCAGCTAGGTGCCAAGGGGTTGGATCACGTTATGACTTGCTGTCTGAGTTGTCCAGAAGAGAGAAAGATGCAAATATCAAGCCTGATCCAGATATTGATGTCTACATGAAGGCAACTGCTGCTGAAGGCCAGGAATCAAGCTTAGTAACGGACTATACACTAAAGATTTTGGGGTTGGACATATGCGCTGATACTATGGTGGGAGATGAAATGTTGCGTGGGATCTCTGGAGGACAAAGGAAGCGTGTTACTACAGGAGAGATGTTGGTTGGACCAGCAAATGCTCTATTCATGGATGAAATCTCCACTGGGTTGGACAGTTCCACAACATTTCAGATTGTGAGCTCTTTAAGGCAATATGTTCACATTCTTAATGGAACTGCTGTTATATCTTTGCTCCAGCCAGCACCTGAGACTTATGAGCTTTTTGATGACATTATCTTAATCTCTGATGGACAAGTTGTTTATCATGGTCCACGTGAATATGTTTTGGACTTCTTTGAAACCATGGGTTTTAGATGTCCTGAGAGGAAGGGTGTCGCTGATTTTCTTCAAGAAGTGACTTCTAAAAAGGATCAAGCACAGTACTGGGCCCGAAGAGATGAACCATATAGATTTGTGACTGTTACTCAATTTGCTGAGGCATTTCAATCATTCCATATTGGTAGAAAACTTGGCGAGGAGCTTGCAGTTCCATATGACAAGACTAAGAACCACCCTGCTGCATTAACCACTAAGAGTTATGGTATCAACAAGAAGGAGCTGTTAAAGGCTAACTTCTCAAGAGAGTACTTGCTTATGAAAAGGAATTCATTTGTCTACATCTTCAAGCTATGTCAGCTTTTCGTCATGGCCTTAATTGCAATGACACTATTTTTCCGTACCGAGATGCATCATGACACTCAGGATGATGCGGGTGTTTATGCTGGTGCACTGTTTTTTACATTAATAATGGTTATGTTTAATGGAATGGCTGAGATTTCTATGACCATTGCTAAGCTTCCTGTTTTCTACAAGCAAAGGGACCTTCTATTTTATCCCTCTTGGGCATACGCTATTCCTTCATGGATTCTTAAGATTCCTGTTACAATAGTGGAGGTTGCTGTTTGGGTATTTCTCACCTACTATGTTGTTGGATTTGATCCAAATGTTGGGAGGCTCTTCAAGCAGTACCTTGTGCTATTATTTGTTAGTCAAATGGCTTCTGGATTATTCCGAGCTATTGCAGCATTGGGTAGAAACATGATTGTTGCCAACACATTTGGTTCCTTTGCAGTTCTCACACTTCTCGCATTGGGTGGTTTCATTCTGTCAAGAAAGGATATCAAAGGCTGGTGGATTTGGGGTTACTGGATTTCACCTTTGATGTATGGGCAGAATGCTTTGATGGTCAATGAATTTCTTGGGAACAGTTGGCACAATGCTACCAACAATTTAGGAGTTCAATATTTGGAAACTCGTGGGTTCTTCACAGATTCATATTGGTATTGGTTAGGCGTTGGGGCACTTGTTGGATTTGTGTTCCTTTTGAACCTGATGTTTGGTTTAGCTCTTGAGTTCCTCGACGCATTTGATAAGCCACAAGCATCAATTACTGAAGATGAACCAGAAGCAGATAACCCTAACCAAGGAAATGTAGCAGAAGTTGAATTACCACGCATAGGAAGAGGTGATTCTGTTGTGGAGTCTAGCCATGGAAAGAAAAAAGGAATGGTCCTTCCTTTTGAACCACATTCTATCACCTTTGATGAGATCATATACTCTGTTGACATGCCACAGGAAATGAAGGAACAAGGTGTACAAGAGGATAGATTGGTCCTTTTGAAGGGTGTTAGTGGAGCATTCAGGCCTGGTGTTCTCACAGCTTTGATGGGTGTTAGTGGAGCTGGTAAGACTACTTTGATGGATGTTCTGGCTGGTAGGAAAACCGGTGGATATATTGAAGGAAGCATAAAAATTTCTGGGTATCCCAAAAAGCAAGAAACTTTTGCTCGTATCTCTGGCTACTGTGAGCAAAATGATATCCACTCACCTCATGTTACAGTTTATGAATCCTTGCTCTACTCAGCATGGCTTCGTTTACCTTCAAGTGTTGATTCCAACACCAGAAATATGTTCATTGAGGAAGTCATGGAACTAGTTGAGCTGAAGCCATTAAGGAACTCATTGGTTGGTTTGCCTGGTGTGAGTGGTCTCTCAACTGAACAACGCAAGAGGTTGACTATTGCAGTTGAATTAGTGGCCAATCCCTCTATAATATTCATGGACGAGCCTACTTCAGGGTTGGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTGAGGAACACTGTTGACACAGGAAGAACAGTTGTTTGTACCATCCATCAACCTAGCATTGACATATTTGAAGCTTTTGATGAGCTATTCCTGATGAAGCGTGGAGGACTAGAAATATATGTTGGACCACTGGGTCGTCATTCAAGCCAATTGATCAAATATTTTGAGAGCATTGAAGGAGTGAGCAAAATCAAAGACGGATATAATCCAGCTACATGGATGTTGGAAGTTACAACTACAGCACAAGAACTTAGTTTGGGTGTTGATTTTACTGATTTATACAAGAATTCTGATCTATATAGGAGAAACAAGCAGCTTATACAAGAACTGGGCCAGTCTGCTCCTGGTTCAAAGGATCTTCATTTCCCTACTCAATACTCTCAGTCATTCTTGGTCCAATGCCAAGCTTGTTTATGGAAACAACGTTGGTCTTACTGGCGTAATCCACCATACACTGCTGTGAGGTTTTTCTTCACTACCTTCATAGCCTTGATGTTTGGAACAATGTTCTGGGACCTTGGAGGCAAACACACAAGTAGACAAGACCTGTTGAATGCTATTGGTTCAATGTACACTGCTGTTCTCTTCCTTGGAGTACAAAACTCTTCCTCAGTACAGCCAGTGGTAGCAGTTGAAAGAACTGTGTTTTATAGAGAAAAGGCTGCTGGAATGTACTCTGCCTTACCCTATGCATTTGCACAGATTCTGGTAGAGGTACCTTACATCTTTGCTCAAGCAGTGACATATGGTGTCATAGTTTATGCCATGATTGGATTTGACTGGACTGCAGAGAAATTCTTTTGGTATCTATTTTTCATGTACTTCACATTTTTGTACTTCACCTTCTATGGCATGATGTCTGTGGCAGTGACACCAAACCACCATGTTGCTTCCATTGTGGCTGCTGCATTTTATGCAATTTGGAATCTCTTCTCAGGATTTGTGGTCCCTAGACCTAGCATTCCTGTGTGGTGGAGATGGTACTATTGGGCTTGTCCAGTGGCTTGGACCATTTATGGATTGGTTGCATCTCAGTTTGGAGATATAATGACAGAAATGCAAACTGAAGGAAAGCCTGTGAAATATTTCCTTGAAGACTATTATGGTATCAAACATGACTTCATTGGAGTTTGTGCTGTTGTTGTTGCTGGCATTGCGGTTCTCTTTGCATTCATTTTCGCTGTTGCAATCAAGGCATTTAACTTCCAAAAGAGATAA 4284 0.4153 MEGSDVYRASNSLRARSSTVWRNSGVEVFSKSSREEDDEEALKWAALEKLPTYNRLKKGLLTASHGITNEIDVTDLGFQERQKLLERLVKVAEEDNEKFLLKLKERIDRVGLDIPTIEVRYEHLNIEAEAFVGSRALPSFINSVTNVIEGLLNLLHIIPSKKKHVTILKDVSGIVKPRRMTLLLGPPSSGKTTLLLALSGKLDKSLQVSGRVTYNGHGMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDLLSELSRREKDANIKPDPDIDVYMKATAAEGQESSLVTDYTLKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHILNGTAVISLLQPAPETYELFDDIILISDGQVVYHGPREYVLDFFETMGFRCPERKGVADFLQEVTSKKDQAQYWARRDEPYRFVTVTQFAEAFQSFHIGRKLGEELAVPYDKTKNHPAALTTKSYGINKKELLKANFSREYLLMKRNSFVYIFKLCQLFVMALIAMTLFFRTEMHHDTQDDAGVYAGALFFTLIMVMFNGMAEISMTIAKLPVFYKQRDLLFYPSWAYAIPSWILKIPVTIVEVAVWVFLTYYVVGFDPNVGRLFKQYLVLLFVSQMASGLFRAIAALGRNMIVANTFGSFAVLTLLALGGFILSRKDIKGWWIWGYWISPLMYGQNALMVNEFLGNSWHNATNNLGVQYLETRGFFTDSYWYWLGVGALVGFVFLLNLMFGLALEFLDAFDKPQASITEDEPEADNPNQGNVAEVELPRIGRGDSVVESSHGKKKGMVLPFEPHSITFDEIIYSVDMPQEMKEQGVQEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSSVDSNTRNMFIEEVMELVELKPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGLEIYVGPLGRHSSQLIKYFESIEGVSKIKDGYNPATWMLEVTTTAQELSLGVDFTDLYKNSDLYRRNKQLIQELGQSAPGSKDLHFPTQYSQSFLVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIALMFGTMFWDLGGKHTSRQDLLNAIGSMYTAVLFLGVQNSSSVQPVVAVERTVFYREKAAGMYSALPYAFAQILVEVPYIFAQAVTYGVIVYAMIGFDWTAEKFFWYLFFMYFTFLYFTFYGMMSVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSIPVWWRWYYWACPVAWTIYGLVASQFGDIMTEMQTEGKPVKYFLEDYYGIKHDFIGVCAVVVAGIAVLFAFIFAVAIKAFNFQKR* 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2546 1427 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1427 - -
Apr2g2546 1427 Pfam Plant PDR ABC transporter associated 722 780 IPR013581 -
Apr2g2546 1427 SMART AAA_5 866 1058 IPR003593 -
Apr2g2546 1427 SMART AAA_5 177 409 IPR003593 -
Apr2g2546 1427 Pfam ABC-2 type transporter 383 436 IPR043926 GO:0140359
Apr2g2546 1427 Gene3D - 843 1073 IPR027417 -
Apr2g2546 1427 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1427 - -
Apr2g2546 1427 Gene3D - 153 460 IPR027417 -
Apr2g2546 1427 CDD ABCG_PDR_domain2 826 1064 IPR034003 -
Apr2g2546 1427 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Apr2g2546 1427 Pfam ABC-2 type transporter 1155 1368 IPR013525 GO:0016020|GO:0140359
Apr2g2546 1427 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 829 1081 IPR003439 GO:0005524
Apr2g2546 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Apr2g2546 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 852 1062 IPR027417 -
Apr2g2546 1427 Pfam ABC-transporter N-terminal 81 142 IPR029481 -
Apr2g2546 1427 CDD ABCG_PDR_domain1 150 407 IPR034001 -
Apr2g2546 1427 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Apr2g2546 1427 Pfam ABC transporter 857 1009 IPR003439 GO:0005524
Apr2g2546 1427 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2546 Apr-Chr2 29648583 29655122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2546 K08711 - gmx:100793825 2573.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2546 2 29648583 29655122 Apr2g2546 2 29648583 29655122 PCT