Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2545 ATGCCTTCACTCTCCGAAGCCTACCGAGCCCACCCAGTGCACGTCCAACACAAGCACCCTGACTTCAACTCCCTACAAGAACTCCCTGAATCATACACTTGGACACAGATTGATGATCACACTAATTACCCTTCCAATTATAGTGTCAAGGAGAGTGTCCCAGTTATTGATCTCAATGACCCCAATTCTTCAAAGCTCATAGGCCATGCATGCAAAACATGGGGTGTGTTCCAAGTGGTAAACCATGGCATCCCCACAAGCCTCCTTGATGACATTCAATGGCTTGGAGAGACCCTTTTCTCTCTTCCTCCTCACCAAAAACACAAAGCAGCTCGTTCCCCTGATGGTGTTGCAGGCTATGGCCTCGCTCGTATCTCTTGTTTCTTCCCCAAACTCATGTGGTCTGAGGGTTTCACAATTCTTGGATCCCCTCTTGAGCATTTCAGCAAACTCTGGCCCCAAGATTATGCCAAATACTGTGATATTGTCTTGCAATATGATGAAACCATGAAAAAGCTAGCGGGAAAGCTGATGTGGCTCATGTTGGATTCTCTGGGTATTACAAAGGAAGACATCAAATGGGCCGGCTCAAAAGGCCAATTCAAAAAGGCTTGTGCTGCCTTGCAATTGAACTCCTACCCGACTTGCCCGGATCCGGATCGGGCCATGGGTCTTGCCCCGCATACCGACTCCACCCTTCTCACAATCCTCTACCAAAACAACATAAGCGGGCTGCAGGTTCATCGGGAAGGCAGCGGGTGGGTGACAGTGCCGCCATTCCCCGGTGGGCTGGTGATCAATGTGGGCGACCTCCTCCACATATTGTCAAACGGGTTATACCCGAGTGTGCTCCATCGGGTTCTAGTGAACCGGAGCCGGCAACGATTTTCAGTTGCCTATCTATATGGGCCCCCATCCAATGTTGAAATCTGTCCACATGCGAAGTTAGTGGGCCCAACACAGCCTCCACTGTACAGGCCAGTGACTTGGAATGAATACCTTGGCACCAAAGCAAAGCATTTCAACAAGGCACTCTCATCCGTTCGGCTTTGTGCACCTATTAACGGTTTGTTTGATGTAAGCGATCCTCGCAAAAATAGTGTGCAAGTGGGCTAG 1116 0.4973 MPSLSEAYRAHPVHVQHKHPDFNSLQELPESYTWTQIDDHTNYPSNYSVKESVPVIDLNDPNSSKLIGHACKTWGVFQVVNHGIPTSLLDDIQWLGETLFSLPPHQKHKAARSPDGVAGYGLARISCFFPKLMWSEGFTILGSPLEHFSKLWPQDYAKYCDIVLQYDETMKKLAGKLMWLMLDSLGITKEDIKWAGSKGQFKKACAALQLNSYPTCPDPDRAMGLAPHTDSTLLTILYQNNISGLQVHREGSGWVTVPPFPGGLVINVGDLLHILSNGLYPSVLHRVLVNRSRQRFSVAYLYGPPSNVEICPHAKLVGPTQPPLYRPVTWNEYLGTKAKHFNKALSSVRLCAPINGLFDVSDPRKNSVQVG* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2545 371 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Apr2g2545 371 SUPERFAMILY Clavaminate synthase-like 16 341 - -
Apr2g2545 371 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Apr2g2545 371 Gene3D - 16 335 IPR027443 -
Apr2g2545 371 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 363 - -
Apr2g2545 371 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 304 IPR005123 -
Apr2g2545 371 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2545 Apr-Chr2 29637720 29639540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2545 67 345 Glycosyltransferase AT5G59530 31.525 2.90e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2545 K04124 - gmx:100798572 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2545 2 29637720 29639540 Apr2g2545 2 29637720 29639540 ECH
Apr2g2545 2 29637720 29639540 Apr2g2545 2 29637720 29639540 PCT