Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2538 ATGGGTGCTTCTCTTCCCCCCAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACTAAACAATACAAAAAGGGCCTCAAAGCAGCCGATGCCATTTTGAAAAAATTCCCAGATCATGGAGAAACTTTATCAATGAAGGGTTTGACGTTAAATTGCATGGATCGTAAGCCTGAAGCATATAAACTGGTTCAACAAGGATTAAGGAATGACCTGAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTTTATCGTTCAGACAGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTGAAAAAAGATCCCGACAATATTGAAATCTTGCGGGACCTATCACTTTTACAGGCTCAAATGCGAGACTTAGCCGGCTTTGTTGAGACACGACAACAACTGTTGACGCTCAAGTCAAATCATCGCATGAATTGGATTGGGTTTGCTGTTGCTCATCATTTGAACTCTAATGCATCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTGGAAGATGATTATCCTCCTGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCACTTTGTTGGAGGAATGTGGATTTTTTGAGAGTGCTCTTGAGGAATTGAGAAGGAAAGAGTTAAAAATTGTTGATAAGCTTGCATATAAAGAACAGGAGGTTTCACTTTTAGTCAAGCTTGGTCACTTGGAAGAAGGAGAGAAATTGTACCGGGCATTACTTTCCATGAATCCTGACAACTATAGATATTATGAAGGCCTCCAAAAATGTGTTGGATTATATTCAGAAAATGGCCATTTTTCTCCTGATGAAATAGATCGGTTGGATGCTTTATACAAAACACTTGGGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTTTACAAGGTGACAAATTTCAAGATGCAGCAGATAGTTATATTAGGCCTCTCCTAAGCAAGGGTGTTCCATCTCTATTCTCCGATCTTTCTTCTTTATACAATCAACCTGGGAAGGCAGACATTTTGGAACAGATCATTCTTGAGTTAGAGAATTCACTTAGGAAAACTGGTCAATACCCGGGAAGAGCGGAAAAAGAGCCCCCCTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGCCAGTATGAGATAGCTCTTTCTAAAATCAATGAGGCTATTGATCACACACCTACTGTCATTGATCTATATTCCATCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTGGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGCTATGTTAACAGTGAATGCGTGAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAACTGCTGTGTTGTTCACAAAAGATGGTGATCAACACAACAATCTACATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTATTTCCGTCAAGGTGATCTTGGACTGGCTCTCAAGAAGTTTCTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACGTTGCGTACATATGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATACTTTCATAAAGCAGCAGCTGGAGCTATCAGATGTTATATAAAATTGCATGATTCTCCTCCAAAGTCTACAGCTGAGGAAGATGATGATATGTCTAAGTTGCCTCCTTCTCAGAAAAAGAAAATGAGACAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAGAATGAAGACTATAGTGCCAGTGGGATATCAAAGTCTGGGAAACGGCATGCAAAACCTGTTGATCCAGATCCACGTGGTGAAAAGTTGTTACAGGTTGAAGATCCATTGCTGGAAGCCACAAAATACTTGAAATTGTTGCAGAAGAATTCACCTAACTCATTGGAGACGCATTTGCTATCTTTTGAATTGTATATGAGAAAACAGAAGATTTTGCTTGCCTTCCAGGCTGTAAAGCAGTTACTTAGGTTGGATGCTGAACACCCTGATTCTCATCGATGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGACTGCTCCTGTGACTGACTGTGAGAAACTGATTTGGAGTGTCTTAGAAGCTGAGCGCCAAACCATTAGTCAGCTGCATGGAAAATCTCTGTTTGAGACAAATAATTCTTTCCTTGAAAAACATGAAGATTCTCTGATGCATAGAGCTGCTTTTGGAGAAATGTTATATATTTTGGATCCCAGCAGAAGGTTGGAAGCTGTCAAGTTGATTGAAGGATCAACAAATAACCTTGTGCCAAGAAATGGAGCACTTGGACCTATCAGGGAATGGAAATTTAAGGACTGTATTGTAGTTCATAAACTTCTTGGAACAGTTCTTGTTGATCAGGATGCTGCATTGAGATGGAAAATGCGTTGTGCTGAGTTTTTTCCGTACTCCACATACTTTGAGGGCAGCTGCAGCTCTGCCTCTCCCAACTCTGTTCTTAGTCAGATATGCAAGAACACTGAAAATGGGAATTCTAACCATTTGGTGGGAGATCACATTGTGGAATCTGTCGCATCAAATGGGAAACTTGAAGAGGCATTTAAAGATCTTGCTTTCTGA 2709 0.4042 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKPEAYKLVQQGLRNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKKDPDNIEILRDLSLLQAQMRDLAGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAIEILEAYEGTLEDDYPPENERCEHGEMLLYKITLLEECGFFESALEELRRKELKIVDKLAYKEQEVSLLVKLGHLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLYSENGHFSPDEIDRLDALYKTLGQQYKWSSAVKRIPLDFLQGDKFQDAADSYIRPLLSKGVPSLFSDLSSLYNQPGKADILEQIILELENSLRKTGQYPGRAEKEPPSTLMWTLFLLAQHYDRRGQYEIALSKINEAIDHTPTVIDLYSIKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDDDMSKLPPSQKKKMRQKQRKAEARAKKEAEEKNEDYSASGISKSGKRHAKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPNSLETHLLSFELYMRKQKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMTAPVTDCEKLIWSVLEAERQTISQLHGKSLFETNNSFLEKHEDSLMHRAAFGEMLYILDPSRRLEAVKLIEGSTNNLVPRNGALGPIREWKFKDCIVVHKLLGTVLVDQDAALRWKMRCAEFFPYSTYFEGSCSSASPNSVLSQICKNTENGNSNHLVGDHIVESVASNGKLEEAFKDLAF* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2538 902 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
Apr2g2538 902 PIRSF NAT_A 1 818 IPR021183 -
Apr2g2538 902 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 884 - -
Apr2g2538 902 MobiDBLite consensus disorder prediction 577 594 - -
Apr2g2538 902 SMART tpr_5 77 110 IPR019734 GO:0005515
Apr2g2538 902 SMART tpr_5 43 76 IPR019734 GO:0005515
Apr2g2538 902 SMART tpr_5 380 413 IPR019734 GO:0005515
Apr2g2538 902 Gene3D - 2 503 - -
Apr2g2538 902 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Apr2g2538 902 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515
Apr2g2538 902 Pfam TPR repeat 84 123 - -
Apr2g2538 902 Gene3D - 505 725 - -
Apr2g2538 902 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Apr2g2538 902 MobiDBLite consensus disorder prediction 606 622 - -
Apr2g2538 902 Coils Coil 596 624 - -
Apr2g2538 902 SUPERFAMILY TPR-like 80 300 IPR011990 GO:0005515
Apr2g2538 902 MobiDBLite consensus disorder prediction 577 644 - -
Apr2g2538 902 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Apr2g2538 902 PANTHER BNAC02G23120D PROTEIN 10 884 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2538 K20792 - gmx:100776968 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2538 2 29569697 29582117 Apr2g2538 2 29569697 29582117 ECH
Apr2g2538 2 29569697 29582117 Apr2g2538 2 29569697 29582117 PCT