Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2520 ATGCCAATTTCAAAAGCTTCATGGTACACCCTTCTCCTTCGTAAACCTCATCACCATCAAAACCACGTCGTTTTAACGCGCCGTTGTGGAGTGACCTGCACGCTGGGTCTCATGCTATTCCTCACCACCGTCTACGTTTTCTGGCCATCCGATCCTAACCTGACCATCGTACGACTGAAGCTGAAGCGGATGAAGTTGCACCCTTTGCCGCCGATCACCGTAGACATCTCCATGGTTCTCACGCTAATGGTGCACAATGCTGACGTGTACTCCTTGGACTTCGGAGCCGTTAACGTGGCCGTTGCCTACAGGGGGAAGATGCTGGGGCACGTGACGGCGAAACACGGTCACGTGAGGCCCAGGGGATATTCCTACGTGGATGCTGACGTGGAATTTTCCGGCATTAGTGTGGTCCCTGAGATGGTGCTTTTGCTGGAGGACCTGGCCAAGGGTATCGTACCCTTCGATACAATTAGCCAAATTAGGGGCCAATTGGCCCTTCTCTTCCTTCACTTCCCTATGAAGGCAAAACTATCATGTGAGGTTTTGGTGAGTACACGAAACCAGACAATTGTTCGTCAACATTGTCTCCACCAGTGA 600 0.5167 MPISKASWYTLLLRKPHHHQNHVVLTRRCGVTCTLGLMLFLTTVYVFWPSDPNLTIVRLKLKRMKLHPLPPITVDISMVLTLMVHNADVYSLDFGAVNVAVAYRGKMLGHVTAKHGHVRPRGYSYVDADVEFSGISVVPEMVLLLEDLAKGIVPFDTISQIRGQLALLFLHFPMKAKLSCEVLVSTRNQTIVRQHCLHQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2520 199 Pfam Late embryogenesis abundant protein 82 175 IPR004864 -
Apr2g2520 199 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 198 - -
Apr2g2520 199 SUPERFAMILY LEA14-like 38 147 - -
Apr2g2520 199 PANTHER EXPRESSED PROTEIN 11 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2520 Apr-Chr2 29456395 29457325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2520 - - gmx:100792375 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2520 2 29456395 29457325 Apr2g2520 2 29456395 29457325 ECH
Apr2g2520 2 29456395 29457325 Apr2g2520 2 29456395 29457325 PCT