Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2516 ATGTTTGATGCTTTATTGAAGCCCAAATTCTATTCCAAATGTAAATCGTGCTTGAGGTTAATAAAGACAAGGCTGGAGACTATAAGGAAGAAAAGGAACGCAGTGCAGAAATTTCTTAAGAAAGATATCGCCGAACTTCTTAGGAGTTCCCTTGATTACAACGCATATGGAAGGGCTGAAGGGCTTCTCATAGAGCAAAACATGTCCTCTTGCTATGAACTCGTTGCAAAGTTTGCTACTTCCATATCTGCTCATGTTCGAGACCTTTATAAGCAGAGGGATTGCCCCGATCAATGCAAGGAAGCTATACCCTCATTGATGTATGCTGCAGCAAGGTTTTCTGATCTTCCCGAACTCCGTCACCTCAGAACTTTGTTCACTCAGAAATATGGGAATTCTCTTGAAACTTATATAAGTCAAGAGTTTGTTGAAAGGTTGAGGCAAGATCCTCCTTCGAAAGAAATGAAGATCCAGTTATTGCATGATTTAGCCAAAGAGTTCTCTATAGAATGGGATAGCAAGGCTTTGGAGCAGAGACTTTACTCACCGCCTCAGTTGCATCAAGAGAAGCCTAAACATCATGATCTAAATGATTATGAAGCTGTCCCCAAAATAGATGATGAAAGAGATACCCAATCTCAAGGAAGGAAGAATATCAGGGATGCGTCTTGGAGGCTGCAAACCAACACTGACGATGAAACAACTACTGACATTTCATTCCTGGATGACCCAAAGGCTTCTTCAAGTTCATCAGAAAGTGTGTATGAGGTTGATCTAGAAATTAAGAAGCCATTTTCCTACAACCTTATTCCACCACCTTATGTCAAAGAAAATTTGAATAAAGGTGAATGCAGTTTGAAGGAAACAACAGCAGCAGAAGCTCCACCTGAAAAGGAATCAAATCATGATCTTCATGAACCAGTTGCAAAAGTAAAGCCAATACCAAGATCAGTCAGGCGGAGACGTCCCAACAGAGTGACAGATTCTAAAACTCCAACAAAAGTAGATTCAGCAGGAATGGAATCTGAGAAAGCAAAGCAACTTGCAGCAGACGAAGGCGATTCAAGGGATGAAGAAAGGATAATGGATGGGCTTTTACTACATTACAGTAAGAAACAGTCTCCTTTTGAATCAAGCACAAGAAACCAATATACAAAAGCTTACCCTTTGAAAGGACTAGAATATGATAATGGAAATAGAAAATCAAATTTATGTGCACCTCTTGTTAGAGGGACATCTCTGCCTCCGGAAGAGACAAATAAGGTAGAAACATTAGAAGGGCTTGGAAGAGCAACTTCCTTTGTACCAGAAATGTTGAGGACAGTGCATCCTACTTTACCAGATTACGATGACTTGCTGACTCGTCTTGCAGCTCTCAGAGGAAGATAA 1389 0.4053 MFDALLKPKFYSKCKSCLRLIKTRLETIRKKRNAVQKFLKKDIAELLRSSLDYNAYGRAEGLLIEQNMSSCYELVAKFATSISAHVRDLYKQRDCPDQCKEAIPSLMYAAARFSDLPELRHLRTLFTQKYGNSLETYISQEFVERLRQDPPSKEMKIQLLHDLAKEFSIEWDSKALEQRLYSPPQLHQEKPKHHDLNDYEAVPKIDDERDTQSQGRKNIRDASWRLQTNTDDETTTDISFLDDPKASSSSSESVYEVDLEIKKPFSYNLIPPPYVKENLNKGECSLKETTAAEAPPEKESNHDLHEPVAKVKPIPRSVRRRRPNRVTDSKTPTKVDSAGMESEKAKQLAADEGDSRDEERIMDGLLLHYSKKQSPFESSTRNQYTKAYPLKGLEYDNGNRKSNLCAPLVRGTSLPPEETNKVETLEGLGRATSFVPEMLRTVHPTLPDYDDLLTRLAALRGR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2516 462 Pfam Regulator of Vps4 activity in the MVB pathway 15 169 IPR005061 GO:0015031
Apr2g2516 462 PANTHER IST1 FAMILY MEMBER 9 461 IPR005061 GO:0015031
Apr2g2516 462 MobiDBLite consensus disorder prediction 183 252 - -
Apr2g2516 462 MobiDBLite consensus disorder prediction 186 216 - -
Apr2g2516 462 Gene3D - 4 180 IPR042277 -
Apr2g2516 462 MobiDBLite consensus disorder prediction 337 357 - -
Apr2g2516 462 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 9 461 - -
Apr2g2516 462 MobiDBLite consensus disorder prediction 289 357 - -
Apr2g2516 462 MobiDBLite consensus disorder prediction 217 252 - -
Apr2g2516 462 MobiDBLite consensus disorder prediction 292 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2516 Apr-Chr2 29439593 29441415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2516 - - aprc:113856018 894.034