Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2504 ATGGTTCGAGCAGGGGAACAAGAGCAGGAAGGCAGGTCCAAACTATTCAATTTCAGAGGGATGTTTGAGGGCACTGGGAGGCATACCAAGAGCTTAAGCGTTGACACTGCTAGCGCGTTGGATCCTACAGAGGATGGCTCTGCTTCATCAAGAAGTCAAGGATCAAAGCCTCTTAATGATTCAGATAAGCTTCCTAAGCCAAGGGTAATGAGCAAAGAGGAAATCGCTGCAAAGGAGGCCAGAGAGAAGCTTTTGCAAGAGATGGAACAGATGAAGGAGAAATTTTCCAAACTGCTATTGGGTGAGGACATGTCCGGTGGAGGAAAGGGTGTTTCGTCTGCTTTGGCCTTGTCAAATGCATTCACAAACCTTGCTGCTTCGATTTTTGGTGAACAAAGGCGCTTGGAACCAATGCCAGCAGAAAGGAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACGGATTACGTTGTTGAAATGGTTCCTTCACAACAGAAGTCCAAGGATGGTTCACAGATGGAGATTATGACAACGCGACAACGAACCGATCTCCACATGAATATCCCCGCCTTGCGCAAGCTTGATGCAATGCTTATTGAATGTCTAGATAACTTCAAAGATCAAAATGAGTTCTATTATGTATCGAAAGATTCAGAAGATTCAGATCAAGACGATTCCAAGAAAAAAAATGATGATAAATGGTGGTTACCTACCCCTAAGGTTCCTGCAGAAGGTCTATCTGACATGGCTAGAAAATTTTTACAGTATCAGAAAGATTGTGTTAATCAAGTACTTAAAGCGGCCATGGCAATAAATGCTCAAATTATAACAGAAATGGAGATCCCTGAAAGCTATATTGATTCCCTACCCAAGAATGGAAGAGCAAGTCTAGGAGACTCGATCTACAGGAGTATAACAGTTGAATTTTTTGATCCTGATCAGTTCCTCTCAACCATGGACTTATCATCAGAACATAAAATCCTAGATCTCAAGAATAGAATTGAAGCATCAATAGTGATTTGGAAGCGGAAGATGAACCAAAAGGATGGAAAATCTACTTGGGGTTCTGCAGTGAGTTTGGAAAAAAGAGAGCTCTTTGAAGAGAGAGCAGAAACCATATTACTTCTCTTAAAGCACCGTTTCCCTGGCATTCCTCAATCTGCATTGGATATAAGCAAAATCCAATTCAACAAGGATGTGGGGCAAGCTGTTCTAGAAAGCTATTCAAGAATATTGGAAAGTTTAGCCTTTACAGTACTTTCGAGAATAGATGATGTACTCCAAGCAGATTATCAAATTCAAACTCAAAATCTAAATGGAAGAAGGAGAAGCTCAGTTTCAAGGCCGAGTCCTAGAGAAGATTTAGACAAGGGTAGCACAGAAACACCTGCTTCAATGACATTATCAGATTTCATGGGTTGGGGCTCTGATCAAGGTGACTCAGACATGAAGAAGGACCCCTTAGCTTCAGATGACTTTTGCAAAGACGATGATGCAAAGCAACAAAAACTTTCGAATGTAGTCACCAACAAGAAGGGGTCATATCTTGAGAACTTGGGCGTCATGAGAAGCCCCACATCGCGCCATTAA 1599 0.4178 MVRAGEQEQEGRSKLFNFRGMFEGTGRHTKSLSVDTASALDPTEDGSASSRSQGSKPLNDSDKLPKPRVMSKEEIAAKEAREKLLQEMEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFGEQRRLEPMPAERKARWRKEIDWLLSVTDYVVEMVPSQQKSKDGSQMEIMTTRQRTDLHMNIPALRKLDAMLIECLDNFKDQNEFYYVSKDSEDSDQDDSKKKNDDKWWLPTPKVPAEGLSDMARKFLQYQKDCVNQVLKAAMAINAQIITEMEIPESYIDSLPKNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDGKSTWGSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQIQTQNLNGRRRSSVSRPSPREDLDKGSTETPASMTLSDFMGWGSDQGDSDMKKDPLASDDFCKDDDAKQQKLSNVVTNKKGSYLENLGVMRSPTSRH* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2504 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 436 IPR005512 GO:0005085
Apr2g2504 532 MobiDBLite consensus disorder prediction 463 477 - -
Apr2g2504 532 ProSiteProfiles PRONE domain profile. 78 443 IPR005512 GO:0005085
Apr2g2504 532 MobiDBLite consensus disorder prediction 29 59 - -
Apr2g2504 532 MobiDBLite consensus disorder prediction 441 509 - -
Apr2g2504 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 86 532 IPR038937 GO:0005085
Apr2g2504 532 Gene3D PRONE domain, subdomain 1 92 433 - -
Apr2g2504 532 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 86 532 - -
Apr2g2504 532 MobiDBLite consensus disorder prediction 25 73 - -
Apr2g2504 532 Gene3D PRONE domain, subdomain 2 283 399 - -
Apr2g2504 532 Coils Coil 70 94 - -
Apr2g2504 532 MobiDBLite consensus disorder prediction 482 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2504 Apr-Chr2 29371042 29374120 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2504 - - gmx:100781787 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2504 2 29371042 29374120 Apr2g2504 2 29371042 29374120 ECH