Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2476 ATGGATAGTGGGAACTTAACAAGAAGCATCAGTAGAAGCTTAAGCAGGTCAAGTTGGGGAATGGAGGGAGTGTTTGCGAGTGGGAGGTATTCAAGAAGGACTTCAAATGTTGATGAAGATGAAGAGGCTCTCAAGTGGGCTGCCATAGAGAAATTGCCCACTTATGATAGGCTAAGAACAAGTATCCTTCAAACTTATGCTGAGGGTGATCTTCCTACCCCTTTACAACACAAGGAAGTCGATGTTCGAAAGTTAGACATGAATGAAAGGCAACAGTTCATTGACAAAGTCTTCAAGGTTGCTGAAGAAGACAATGAAAAGTACTTGCGAAAGTTCAGAAACCGAATTGAAAAGGTTGGTATCCGACTCCCAACAGTGGAAGTGAGGTTTCAAAATTTGACTGTTGAGGCTGATTCCCACGTTGGCAGCAGAGCTCTGCCCACCCTACCAAACGTTGCATTGAACATTGTTGAATCAGGCCTTAGCTTGTGTGGGATCACTACTGCCAAGAGAAGAAATCTCACAATTCTTAAAAATGTCTCTGGCATTATTAAGCCTTCAAGGATGGCCCTTTTGCTAGGACCCCCTTCTTCTGGGAAAACGACCCTTTTGTTGGCATTGGCTGGAAAATTGGATAGTGACTTGAGGGTTAATGGAGAAATAACTTACAACGGGTACAAGTTTAATGAGTTTGTCCCTAGAAAGACTTCAGCCTACATCAGCCAAAATGATGTACATCTGGGAGAAATGACTGTAAAAGAAACCTTGGATTTCTCAGCTAGATGCCAAGGAGTTGGCACACGATATGACCTATTGGCCGAGCTTGCTCGAAGGGAAAAGGAAGCTGGCATATTTCCAGAGGCAGAACTTGACCTCTTCATGAAGGCTACTGCAATGGAAGGAACAGAAAGCAGTCTCATTACTGACTACACTCTAAAAATATTGGGACTTGATATTTGCAAAGATACTATTGTGGGCGATGACATGCAGAGAGGTGTATCTGGTGGCCAAAAGAAGCGTGTAACAACAGGGGAAATGATTGTTGGGCCCACGAAAACACTGTTCATGGATGAGATATCAACGGGCCTTGATAGTTCTACAACGTATCAAATAGTAAAATGCTTCCAACAAATTGTGCACCTCACTGAAGCAACCATATTCATGTCCCTACTCCAACCTGCTCCAGAGACGTTTGATCTTTTTGATGATATAATCTTAATATCTGAGGGGCAAATAGTTTATCAGGGCCCACGTGAGCACATCCTTGAGTTCTTTGAATCCTGTGGATTTAGATGCCCTGACAGAAAAGGAACTGCGGATTTCTTGCAAGAGGTTACTTCAAGGAAAGATCAAGAACAATATTGGGCAAATAGAAACCTACCATATCGTTATGTTACAGTGAGCGAATTTGCAAACAGGTTCAAGCACTTTCATGTTGGATCGCAGCTTGAGCAAGAGCTTTCTGTGGCATTTGACAAATCAACAGGACATAGAGCAGCTCTTGTTTTCAAGAAATACACAGTACCCACAACGGGACTTCTTAAAGCATGTTGGGACAAGGAATGGTTGCTAATCAAGAGAAACTCTTTTGTCTATATATTCAAGACAGTTCAAATATGCATTATTGCTGTCATAACCGCAACTGTGTTCTTTAGGACCAAAATGCATCGAAGGAATGAGGATGATGCAGCTCTTTACATAGGTGCAATATTATTTAGCATGATTATGAACACATTCAATGGTTTTTCTGAGCTACCCCTCACAATTGCAAGGCTTCCCGTATTCTACAAGCATAGAGACCACCTTTTCCATCCTCCTTGGACTTACACCCTTTCAAATTTTTTACTTCGGATTCCTTTCTCTATATTTGAGGCTATTGTTTGGGTGCTTATTACGTACTACACAGTAGGATTAGCACCTGAAGCTAGTAGGTTCTTCAAACACTTGTTGCTAGTATTTCTTGTCCAACAAATGGCAGCTGGTATGTTTAGGGTTATATCTGGAGTTTGTAGGACAATGATCATTGCTAACACGGGTGGAGCCCTTATGCTTCTTCTTGTGTTTTTACTTGGAGGTTTCATCCTTCATAAAAATGACATTCCACATTGGTGGATATGGGGTTACTGGGTTTCGCCATTATCATACGCATTCAATGCTTTTGCTGTGAATGAACTGTTTGCTCCAAGGTGGAGCAAACCGTCCTCGGATGGTACAACCACATTGGGTTTGGCTACGTTGCATAACTTCGATGTTTTTAGGGAAAAACGATGGTACTGGATTGGTGCAGGTGTTCTTTTGGGTTTCACTATTTTGTTCAATGTTCTTTTCACCTTTGCGCTTATGTACCTTAATCCTATTGCAAAAAAACAAGCAATTATATCTGAAGAAGAAGCAAATGAAATGGATGATATTGGAGGACACTCAAAGGAAGAACCCAGACTTGTAAGGCCAGATCCCAATAGAGAGTTGGCCTTTGAATCATCTTTTGCTGATGGAAACAACACAAGAGAAGTGGCAATGCAACGAATGAGCAGTCAAGGTAATCCTAGCGGAATAAGAAGTCCTAATCCAGCGCTTGAGTCATCAACTAGAGTTGCACCCAAGAGAGGAATGGTTCTACCTTTTCAACCACTTGCAATGTCTTTTGACAGTGTTAATTACTATGTGGACATGCCTGCAGAAATGAAGGAGCAAGGAGTAACAGAAGATAGACTACAATTACTTAGGGAAGTAACTAGTGCCTTTAGGCCTGGAGTTCTAACTGCTCTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCAGGAAGAAAAACTGGCGGGTACATTGAAGGAGATATTAGAATTTCTGGATACCCTAAGAATCAAGAAACCTTTGCAAGAATTTCTGGCTATTGTGAGCAAACTGATATTCATTCACCACAAGTTACTGTTAGAGAATCTTTAATATATTCAGCTTTCCTTCGGTTACCAAGAGAAGTCAATAGTGAAGAAAAAATGAAATTTGTGGATGAAGTAATGGAGTTGGTTGAGTTGAATAATCTTAGAGATGCTATAGTTGGTCTTCCGGGTGTTACAGGGTTGTCAACTGAACAGAGAAAAAGGCTAACAATTGCTGTTGAGCTTGTTGCTAATCCTTCAATCATTTTTATGGACGAACCCACTTCAGGTCTCGATGCTAGAGCAGCAGCAATTGTTATGAGGACCGTAAGAAACACTGTTGACACTGGAAGAACAGTTGTTTGCACAATTCACCAGCCTAGTATTGATATCTTCGAAGCTTTTGATGAGTTACTGTTGATGAAGAGAGGAGGACAAGTGATATACTCAGGACCATTAGGAAGGAATTCTCACAAGATTATAGAATATTTTGAGGCAATCCCAGGGGTCTCAAAAATTAAGGATAAGTACAACCCAGCAACATGGATGTTAGAGGTGAGCTCCATAGCGGCTGAAGTTCGGCTTGGAATGGACTTTGCTGAATACTACAAATCATCTTCTTTGTACCAGAGAAATAAAGCTCTTATAAGAGAGTTAAGCACACCTCCTGCAGGAGCAAAAGACTTGTATTTCCCCACTCAGTACTCTCAATCCACTTGGGAACAATTCAAATCTTGTCTGTGGAAGCAATGGTTGACTTATTGGAGGAGTCCAGATTATAACCTTGTTAGATGTTTCTTCACCTTGGCTGCAGCTCTCATGGTAGGGACAATATTTTGGAGGGTTGGCAAGAAAAGGGAAAACTCAAGTGATCTAAATACTATTATTGGAGCACTGTATGGTTCTGTGTTTTTTGTTGGTGTTAACAATTGCCAAACTGTTCAACCAGTCGTAGCCATTGAGAGAACAGTATTCTATCGTGAAAGGGCTGCTGGAATGTATTCTGCTTTACCTTATGCCCTTGCACAGGTTGTTGTTGAAATCCCATATGTGTTTTCTGAAACTATATATTTCGCATTCATAGTGTATGCTATGGTGAGCTTCGAATGGAAAGTTGCCAAATTCTTCTGGTTCTTCTTTATCAGTTTTTTCTCCTTCTTGTATTTCACATATTATGGGATGATGACCGTTTCTATTACACCAAACCACCAAGTGGCATCAATCTTAGGGGCAGCATTTTATGGACTCTTTAATCTTTTCTCTGGTTTCTTTATTCCAAGACCAAAAATTCCTAAATGGTGGGTTTGGTATTACTGGATTTGTCCTGTAGCATGGACAGTTTATGGATTAATTGTCTCACAGTATAGAGATGTTACGGTCCGCATTAGTGTGCCTGGCTTGGATAATCAAACTATTCCTATTAAGCAATATATCGAAGATCATTACGGGTTTAAACCAGACTTTATGGGGCCAGTTGCTGCTGTTTTGGTTGGTTTCACTGTCTTCTTTGCTTTTGTATTTGCCTTCTGCATCAAAGTACTCAACTTCCAAACAAGATAA 4452 0.4075 MDSGNLTRSISRSLSRSSWGMEGVFASGRYSRRTSNVDEDEEALKWAAIEKLPTYDRLRTSILQTYAEGDLPTPLQHKEVDVRKLDMNERQQFIDKVFKVAEEDNEKYLRKFRNRIEKVGIRLPTVEVRFQNLTVEADSHVGSRALPTLPNVALNIVESGLSLCGITTAKRRNLTILKNVSGIIKPSRMALLLGPPSSGKTTLLLALAGKLDSDLRVNGEITYNGYKFNEFVPRKTSAYISQNDVHLGEMTVKETLDFSARCQGVGTRYDLLAELARREKEAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDDMQRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPREHILEFFESCGFRCPDRKGTADFLQEVTSRKDQEQYWANRNLPYRYVTVSEFANRFKHFHVGSQLEQELSVAFDKSTGHRAALVFKKYTVPTTGLLKACWDKEWLLIKRNSFVYIFKTVQICIIAVITATVFFRTKMHRRNEDDAALYIGAILFSMIMNTFNGFSELPLTIARLPVFYKHRDHLFHPPWTYTLSNFLLRIPFSIFEAIVWVLITYYTVGLAPEASRFFKHLLLVFLVQQMAAGMFRVISGVCRTMIIANTGGALMLLLVFLLGGFILHKNDIPHWWIWGYWVSPLSYAFNAFAVNELFAPRWSKPSSDGTTTLGLATLHNFDVFREKRWYWIGAGVLLGFTILFNVLFTFALMYLNPIAKKQAIISEEEANEMDDIGGHSKEEPRLVRPDPNRELAFESSFADGNNTREVAMQRMSSQGNPSGIRSPNPALESSTRVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVTEDRLQLLREVTSAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPREVNSEEKMKFVDEVMELVELNNLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVSKIKDKYNPATWMLEVSSIAAEVRLGMDFAEYYKSSSLYQRNKALIRELSTPPAGAKDLYFPTQYSQSTWEQFKSCLWKQWLTYWRSPDYNLVRCFFTLAAALMVGTIFWRVGKKRENSSDLNTIIGALYGSVFFVGVNNCQTVQPVVAIERTVFYRERAAGMYSALPYALAQVVVEIPYVFSETIYFAFIVYAMVSFEWKVAKFFWFFFISFFSFLYFTYYGMMTVSITPNHQVASILGAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDVTVRISVPGLDNQTIPIKQYIEDHYGFKPDFMGPVAAVLVGFTVFFAFVFAFCIKVLNFQTR* 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2476 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 434 IPR027417 -
Apr2g2476 1483 MobiDBLite consensus disorder prediction 843 861 - -
Apr2g2476 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 434 IPR003439 GO:0005524
Apr2g2476 1483 SMART AAA_5 917 1109 IPR003593 -
Apr2g2476 1483 SMART AAA_5 186 411 IPR003593 -
Apr2g2476 1483 Pfam ABC-2 type transporter 392 471 IPR043926 GO:0140359
Apr2g2476 1483 Pfam ABC-2 type transporter 1089 1150 IPR043926 GO:0140359
Apr2g2476 1483 CDD ABCG_PDR_domain2 877 1115 IPR034003 -
Apr2g2476 1483 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1483 - -
Apr2g2476 1483 Gene3D - 894 1127 IPR027417 -
Apr2g2476 1483 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1483 - -
Apr2g2476 1483 MobiDBLite consensus disorder prediction 843 864 - -
Apr2g2476 1483 Pfam Plant PDR ABC transporter associated 730 793 IPR013581 -
Apr2g2476 1483 Pfam ABC transporter 908 1060 IPR003439 GO:0005524
Apr2g2476 1483 Pfam ABC transporter 177 359 IPR003439 GO:0005524
Apr2g2476 1483 Pfam ABC-2 type transporter 514 725 IPR013525 GO:0016020|GO:0140359
Apr2g2476 1483 Pfam ABC-2 type transporter 1205 1419 IPR013525 GO:0016020|GO:0140359
Apr2g2476 1483 Pfam ABC-transporter N-terminal 92 152 IPR029481 -
Apr2g2476 1483 Gene3D - 164 468 IPR027417 -
Apr2g2476 1483 CDD ABCG_PDR_domain1 170 416 IPR034001 -
Apr2g2476 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 880 1133 IPR003439 GO:0005524
Apr2g2476 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 1117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2476 Apr-Chr2 29173668 29184240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2476 K08711 - gmx:100801386 2576.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2476 2 29173668 29184240 Apr2g2476 2 29173668 29184240 ECH
Apr2g2476 2 29173668 29184240 Apr2g2476 2 29173668 29184240 PCT