Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2457 ATGGGTTTCTTCAAATGGATCAACTTGTTCATCTTTTTTAATTTCTTTGCTGCGACCCCCATCTTCTCTGATTCCTCCTTCAGCTTAAAGGAACACGCTGCCAAGTTTCTAGATTTAGCGAAGGATCCTCGGGTTTTTGACTGGATGGTGGGTATCAGGAGGAAAATTCATGAGAATCCAGAACTGGGTTTTGAGGAATTTGAGACCAGTGAGCTGATTAGAGCGGAATTGGATAAACTGGGCATCTCATATAAGCACCCAGTTGCAGTTACTGGTGTTATTGGCTTCATAGGGACTGGACTTTCTCCTTTTGTTGCAATAAGAGCAGACATGGATGCTCTTCCTATGCAGGAAATGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGCGGTCATGATGCTCATGTTGCTATGCTTCTCGGTGCTGCAAAGATCCTCAAAGAGCATGAAAAGGAGATACCGGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTCCTAGAAAATATCTCTGCCATCTTCGGATTGCATGTTGATCCTACCTCACCTTTAGGTGAAGTGTCCTCTAGGTCAGGTCCTATGTTGGCAGGAAGTGGTTTCTTTGAAGCAATAATAAATGGTAGGGGAGGTCATGCAGCTATCCCTCAGCACTCTATAGACCCAATATTGGCAGCTTCCAATGTGATTGTTAGCTTACAACATATTGTTTCTCGTGAGGCCGATCCTCTGGACTCCCAGGTTGTGACTGTAGGAAAATTTCAAGGAGGTGGTGCATTCAATGTTATTCCAGACTCCGTCACAATTAGTGGCACCTTCCGAGCTTTTTCAAAGGAAAGCTTAATGCAACTAAAGCAGCGGATTGAGCAGGTTATCACAGGGCAAGCTGCTGTGCAAAGATGCAATGCAACGGTCAACTTTCTTGATGAAGAGAGACTTTTCTTCCCCCCAACAATAAACAATGGTGACTTGCATGAGTTTTTTCGAAGCGTTGCATGGAGTTTGGTAGGAGTAGATAAAGTTAAGGACATGCAACCAGTGATGGGAGCTGAGGACTTTGCATTCTATCAAGAGGTTTTTCCTGGCTACTTCTTCCTACTTGGAATGGAGAGTGCTTCTGGTGAACGTCTTGGGTCAGCACACTCTCCCTCTTTCAAAATCAATGAAGATGTACTTCCTTATGGAGCTGCATTTCATGCGTCTTTGGCTACTACATATCTTCTCAAATCAAATCAACAAGTACCACTAGTGAAGGGGCAATATCACGATGAATTATAA 1326 0.4382 MGFFKWINLFIFFNFFAATPIFSDSSFSLKEHAAKFLDLAKDPRVFDWMVGIRRKIHENPELGFEEFETSELIRAELDKLGISYKHPVAVTGVIGFIGTGLSPFVAIRADMDALPMQEMEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKEIPGTVVLVFQPAEEGGGGAKKILDAGVLENISAIFGLHVDPTSPLGEVSSRSGPMLAGSGFFEAIINGRGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTISGTFRAFSKESLMQLKQRIEQVITGQAAVQRCNATVNFLDEERLFFPPTINNGDLHEFFRSVAWSLVGVDKVKDMQPVMGAEDFAFYQEVFPGYFFLLGMESASGERLGSAHSPSFKINEDVLPYGAAFHASLATTYLLKSNQQVPLVKGQYHDEL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2457 441 Gene3D Zn peptidases 49 408 - -
Apr2g2457 441 TIGRFAM amidohydrolases: amidohydrolase 49 410 IPR017439 GO:0016787
Apr2g2457 441 CDD M20_IAA_Hyd 49 423 IPR044757 GO:0009850|GO:0016787
Apr2g2457 441 PIRSF Amidohydrol_AmhX 37 427 IPR017439 GO:0016787
Apr2g2457 441 Pfam Peptidase dimerisation domain 214 311 IPR011650 -
Apr2g2457 441 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 441 IPR017439 GO:0016787
Apr2g2457 441 SUPERFAMILY Bacterial exopeptidase dimerisation domain 213 332 IPR036264 -
Apr2g2457 441 Gene3D - 213 331 - -
Apr2g2457 441 PANTHER AUXIN CONJUGATE HYDROLASE 1 441 - -
Apr2g2457 441 Pfam Peptidase family M20/M25/M40 106 419 IPR002933 GO:0016787
Apr2g2457 441 SUPERFAMILY Zn-dependent exopeptidases 45 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2457 Apr-Chr2 29026531 29029897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2457 K21604 - gmx:100794121 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2457 2 29026531 29029897 Apr2g2457 2 29026531 29029897 ECH
Apr2g2457 2 29026531 29029897 Apr2g2457 2 29026531 29029897 PCT