Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2453 ATGTTGCTGCCTTCCAGTGGAGGAGTGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAGGCCCAGAGGCATCACTTGGTTGTGAGGGAGATTGGCGAAGAGATTGATTTAGAAATTGGACCTGGGGATGATGATCCTTCATTTGGTAACACTACTCTAATTGGTGGCCCGCCACGAGAATCTTCTACAGAAGAGCACGTAGAGAGCAAACAGATGGGGATGGTTTCTCAGCTTCCTAATGATGCTCAAGATATGTCAAAGACCCAACCAGGGAAAAGGAAGAAGAAAGTTGTTAAAAGATGGAGAGAGGAATGGGCAGACACCTATAAATGGGCTTACGTTGACGTGAAAGATGGAACAGCAAGGATTTTTTGCTCTGTCTGCAGGGAGTATGGCAGGAAGCACAGAAGAAATCCTTATGGGAATGAAGGCAGTCGAAACATGCAGATGAGTGCCCTAGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAGATGGCCTCCAAGGATAAAATTGTTGTTGACAAGCCCGTTTATGTTAAAGCTGGGTCAATTCTTGAAGCTACTTTAAAAAGGGATCCTCATGAAACTGAATTCATTCAGGCAGTTCAGGAAGCAGTTCGTGCTCTTGAAAGAGTCATAGCAAAAAATTCCCATTATGTTAGCATCATGGAACGCTTGGTGGAACCTGAACGAATGATTATTTTCCGAGTTCCATGGGTGGATGATAGGGGTGAGACACATGTTAATCGTGGTTTCCGCATACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTATAGCCAAGTTCCTTGGTTTTGAACAGTATACTGAGATTCAACTACCATCAAGTGAAAAGAATCTAGATTGCAAGCTGCATTATTTATTGGACCATTTATATGACAGACTTCCTTCTCTGCAGACCTTAAAGAATGCTTTATCACCTTACAAATTAGGAGGAGCCGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATCATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGGTACATGGGTCCTGACAAGGACCTTCCCTCAGAGGAAATGGGTGTTGGTACTCGAGAAATGGGTTATCTTTTTGGGCAGTATAGACGTCTAGCTGGTCATTTTCAGGGGAGTTTTACAGGACCAAGGATATTTTGGTCTGGTGCCAGTCTTCGACCTGAAGCTACAGGTTATGGCTTGGTTTTTTTTGCCCAGCTCGTACTTGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTTGTGAGTGGATCTGGAAAGATTGCAATGCATGTTTTAGAGAAGCTTGTTGCTTATGGTGCTCTTCCCATCTCAGTATCAGATTCAAGAGGATATTTGGTCGATGAAGATGGATTCGACTACATGAAAATATCATTTTTAAGAGACATCAAAGCTCAACAAAGGAGTTTGAGAGATTATTCAAAGACCTATGCTCGGTCTAAATATTATGATGAAGCGAAACCTTGGAATGAAAGGTGTGATATTGCTTTTGCTTGTGCTTCACACAATGAAATTGATCAATCTGATGCCATTAATTTGGTTAATTCAGGTTGTTGCGTACTAGTAGAAGGTTCGAACATGCCCTGTACCCCTGAGGCAATTGATGTTCTGAGGAAAGCTAGTGTTCTCATTGCTCCGGCTATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTCGAGTTAAATCATGAATGCAGTTTGATGCACTGGTCGCCAGAGGATTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAGAAAGAAAGTCCCGAGGCTTTGGTACATGGAGCAGTCATCTCTGCTTTTCTGACCATTGCTCAAGCTATGACGGATCAAGGCTGTGTATAA 1992 0.4212 MLLPSSGGVMNSAMDDMNLIQQAQRHHLVVREIGEEIDLEIGPGDDDPSFGNTTLIGGPPRESSTEEHVESKQMGMVSQLPNDAQDMSKTQPGKRKKKVVKRWREEWADTYKWAYVDVKDGTARIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKAGSILEATLKRDPHETEFIQAVQEAVRALERVIAKNSHYVSIMERLVEPERMIIFRVPWVDDRGETHVNRGFRIQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQYTEIQLPSSEKNLDCKLHYLLDHLYDRLPSLQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYMGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGASLRPEATGYGLVFFAQLVLADMNKELKGLRCVVSGSGKIAMHVLEKLVAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDIAFACASHNEIDQSDAINLVNSGCCVLVEGSNMPCTPEAIDVLRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2453 663 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 236 293 IPR006097 GO:0006520|GO:0016491
Apr2g2453 663 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 319 395 IPR006097 GO:0006520|GO:0016491
Apr2g2453 663 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 325 339 IPR006095 GO:0006520|GO:0016491
Apr2g2453 663 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 404 426 IPR006095 GO:0006520|GO:0016491
Apr2g2453 663 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 446 466 IPR006095 GO:0006520|GO:0016491
Apr2g2453 663 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 583 594 IPR006095 GO:0006520|GO:0016491
Apr2g2453 663 SMART ELFV_dehydrog_3 415 661 IPR006096 GO:0006520|GO:0016491
Apr2g2453 663 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 416 661 IPR036291 -
Apr2g2453 663 PANTHER BNAA06G02140D PROTEIN 6 294 - -
Apr2g2453 663 PANTHER BNAA06G02140D PROTEIN 323 663 - -
Apr2g2453 663 MobiDBLite consensus disorder prediction 39 70 - -
Apr2g2453 663 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 6 294 - -
Apr2g2453 663 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 323 663 - -
Apr2g2453 663 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 190 293 IPR046346 -
Apr2g2453 663 Gene3D Glutamate Dehydrogenase, chain A, domain 3 183 235 - -
Apr2g2453 663 Gene3D - 413 663 - -
Apr2g2453 663 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 319 414 IPR046346 -
Apr2g2453 663 Gene3D Leucine Dehydrogenase, chain A, domain 1 236 298 - -
Apr2g2453 663 Gene3D Leucine Dehydrogenase, chain A, domain 1 308 401 - -
Apr2g2453 663 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 414 661 IPR006096 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2453 Apr-Chr2 29001878 29010677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2453 206 541 EF-hand Containing Proteins AT5G07440 26.190 1.69e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2453 K00262 - gmx:100788009 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2453 2 29001878 29010677 Apr2g2453 2 29001878 29010677 ECH