Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2448 ATGGCTGGGATGGTAGTGATTTTTGACTTTGACTCAACAATCATTGAGTGTGATAGTGATAATTGGGTACTTGATGAGTTTGGTTTAACTGAAGAGTTCTATCAGCTTCTTCCTAGCATGCCTTGGAATCCCCTCATGGATAGAATGATGAATGAACTTCATTCACAAGGAAAAACCATTGAAAACATTGTACAGGTTCTTAATAGAACTCCAATGCATCCCCACATTGTTCCAGCCATTAAGGCAGCATATTCTCTTGGGTGTGAGTTGAAGATTGTGAGCGACGCAAATATTTTCTTTATTGAAACAATATTGAAGTATCATGGGGTGCGGAATTGTTTCTCAGAGGTCATTGCAAATCCTAGTTATGTTGATGAAGAAGGGAGGCTCAGAATTTGCCCCTACCATGATTATCTCAAATCTTCTCATGGATGTAATCTTTGTCCACCAAACATGTGCAAGGGATTGGTCATAGAAAGTATCCAAAATTCACTTGGTGCCGAAGGAAAGAAGAAATTCATTTATCTTGGAGATGGAAATGGAGACTTTTGCCCTAGTTTGAAGCTCAAAGATGGAGATTATTTGATGCCTAGAATGAACTTTCCATTGTGTGATTTAGTATCTAAAAACTCTAATCTCATAAAGGCAGAGGTACATGCATGGAGAGACGGGGAAGAGCTTGAGCATGTTCTTCTCCATATTATCAACAAAGCTATTGGTGAAGGAAACAGCACTAGTAGTTCTATTCCAACAATATCAGTTGATTGCAAGTCGGGGCCAATTTCAATTGATGCTCATATACCTTTTCCTAAGGCCCTCCCAGTTCCTCAATAA 834 0.3909 MAGMVVIFDFDSTIIECDSDNWVLDEFGLTEEFYQLLPSMPWNPLMDRMMNELHSQGKTIENIVQVLNRTPMHPHIVPAIKAAYSLGCELKIVSDANIFFIETILKYHGVRNCFSEVIANPSYVDEEGRLRICPYHDYLKSSHGCNLCPPNMCKGLVIESIQNSLGAEGKKKFIYLGDGNGDFCPSLKLKDGDYLMPRMNFPLCDLVSKNSNLIKAEVHAWRDGEELEHVLLHIINKAIGEGNSTSSSIPTISVDCKSGPISIDAHIPFPKALPVPQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2448 277 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Apr2g2448 277 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 198 IPR006384 GO:0016791
Apr2g2448 277 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Apr2g2448 277 SUPERFAMILY HAD-like 5 185 IPR036412 -
Apr2g2448 277 Gene3D - 3 189 IPR023214 -
Apr2g2448 277 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 277 IPR016965 GO:0016791
Apr2g2448 277 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Apr2g2448 277 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2448 Apr-Chr2 28971109 28972961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2448 K13248 - gmx:100785357 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2448 2 28971109 28972961 Apr10g0977 10 22266062 22268033 PCT
Apr2g2448 2 28971109 28972961 Apr2g2448 2 28971109 28972961 PCT