Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2436 ATGAGCAATTCTAGTGAGAGTTGTTCCACTCAGCTTATTGATGGAGATGGTACGTTCAATGTTGCGGGGATTGAAAATTTCATGAAGGAGGTTAAATTAAGTGAATGTGGCCTTTCCTATGCCGTGGTTTCTATCATGGGTCCACAAAGTAGTGGGAAGAGCACACTGTTAAATCATTTGTTCTGTACCAACTTCAGAGAGATGGATGCATTTAAGGGAAGGTCTCAAACAACCAAAGGAATTTGGATGGCTAGATGTGTTGGTATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACCGATGGAAGAGAGCGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTTCTCTATTTGCTTTGGCTGTTTCTGATATAGTGCTGATAAATATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTAAAAACTGTGTTTCAGGTTATGATGAGATTGTTTAGTCCACGCAAAACAACACTGCTGTTTGTCATACGCGATAAAACAAAGACCCCACTTGAAAATTTAGAGCCCGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCTCATACGGAAACACCATTAAGTGAATTTTTCAACGTTGAAGTTGTTGCTCTTTCTAGCTATGAAGAAAAGGAAGATCAATTTGAGGAGCAGGTTGCTTCCTTGAGGAAACGGTTCTATCAATCTATCGCTCCAGGTGGGCTTGCAGGGGATCGACGTGGAGTAGTTCCTGCTTCAGGCTTTTCTTTTAGTGCTCAGCAAATTTGGAAAGTCATTAAGGAGAACAAGGATCTCGACCTTCCTGCACACAAGGTCATGGTTGCTACTGTGCGATGTGAAGAAATTTCCAATGAGAAATATGACTTTTTTGCTGCAAATGAGGAATGGTGTCAGTTGGAAAAGGCCGTGCAATCTGGCCCAATTTCTGGATTTGGGAAAAAGCTCAATGTACTCCTTGCCGCATGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGATCAGCAAAACAAAAGCAGCTCCAAGACAAATTGTTGCAACTTGTCCAACCAGCATTCCAAATTGCACTGGGACATATAAGGTCTGGAACTTTGGATAAGTTCAAGGAAGCATTTGACAAGGCTTTGAGAGGAGGGGAAGGGTTTTCTTCTGTCGCTAATAAGTGCATAGAGTCTTATATGGCTCAGTTTGATGAAGGATGTGCAGATATTTTCGTTGAAATAGCAAATTGGGATACATCTAAAGTGAGGGAGAAGCTGCGGCGTGATATTGATGCACATATTGCATCTGTACGTGAAGCTAAGATGTCAGAACTTGTTTCCTCATATGAGGAAAAACTGAAGGATGCCTTGTCTGGACCTGTTGAAACTCTTTTGGATGGAGCTAATAGTGATACTTGGCCATCAATAAGGAAACTCCTTAATCGTGAGACTCAATCAGCTGTTTCTGGGTTCTCTGCTGAACTTACCAGATTTGATGTGGACGAACAAACAAGAAAGGACATGATTGTGGGTATAGAGGATTATGCAAAGGGTGTAATAGAAGCCAAGGCTAGAGAAGAAGCTGGCAGAGTTCTAATCCGTATGAAGGACAGGTTTATGACATTGTTTAGTCATGATTCTGATTCAATGCCTCGTATTTGGACGGAACAAGAAGATGTTCGAGCCATCACTAAGACTGCTCGCTCTGCATGCTTGAAGTTGCTGTCTGTAATGGCCGTAATTCGTATGGACGATGAGGACGACATTTATAATATTGAGAAAACATTAACAATTGCACTGGGGGATTCATCAAGCAAGTCTGCTAAAGATAGGAGTATCACAGCAGTTGATCCACTGGCTTCAAGCACTTGGGACCAGGTCCCACCCTCTAAAACATTGATCACACCGGTTCAGTGCAAATCCTTGTGGAGGCAATTCAAGATGGAGACAGAATATAGTGTCTCTCAGGCCATTTCTGCTCAGGATGCCAACAAGCGTAACAACAACTGGTTACCTCCACCATGGGCAATTGTTGCTTTGATTATTCTTGGATTTAATGAATTTATGACACTTTTAAGAAATCCCTTGTATTTATGTCTCATCTTTGTTGGTTATCTCCTCATGAAAGCCCTATGGGTGCAGCTTGACATTACGGGTGAATTTCGCAATGGAGCTCTTCCAGGAATCATATCCTTGTCTACCAAGCTTATTCCAACTGTCATGAACATTGTCAGAAAGCTAGCAGAGGAAGGACAGGTGCCTGCAACCAATAATCCTCCTCGGAGAAATCCTTCAAAAAGCAATCACAATGCTGTTGCTGATGGTAGTGCCACGTCATCTAGTGCTTCATCTCATGTAACTTCATTGGACAAAGGAACCGAGTATCCTGGTCCATCAAAATATGAGTAA 2442 0.4218 MSNSSESCSTQLIDGDGTFNVAGIENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHLFCTNFREMDAFKGRSQTTKGIWMARCVGIEPCTLVMDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLEPVLREDIQKIWDSVPKPQAHTETPLSEFFNVEVVALSSYEEKEDQFEEQVASLRKRFYQSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEISNEKYDFFAANEEWCQLEKAVQSGPISGFGKKLNVLLAACLSEYDVEATYFDEGVRSAKQKQLQDKLLQLVQPAFQIALGHIRSGTLDKFKEAFDKALRGGEGFSSVANKCIESYMAQFDEGCADIFVEIANWDTSKVREKLRRDIDAHIASVREAKMSELVSSYEEKLKDALSGPVETLLDGANSDTWPSIRKLLNRETQSAVSGFSAELTRFDVDEQTRKDMIVGIEDYAKGVIEAKAREEAGRVLIRMKDRFMTLFSHDSDSMPRIWTEQEDVRAITKTARSACLKLLSVMAVIRMDDEDDIYNIEKTLTIALGDSSSKSAKDRSITAVDPLASSTWDQVPPSKTLITPVQCKSLWRQFKMETEYSVSQAISAQDANKRNNNWLPPPWAIVALIILGFNEFMTLLRNPLYLCLIFVGYLLMKALWVQLDITGEFRNGALPGIISLSTKLIPTVMNIVRKLAEEGQVPATNNPPRRNPSKSNHNAVADGSATSSSASSHVTSLDKGTEYPGPSKYE* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2436 813 MobiDBLite consensus disorder prediction 767 801 - -
Apr2g2436 813 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 4 781 - -
Apr2g2436 813 Pfam Sey1 three-helix bundle domain 323 761 IPR046758 -
Apr2g2436 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 276 IPR027417 -
Apr2g2436 813 Coils Coil 218 238 - -
Apr2g2436 813 Gene3D - 16 245 IPR027417 -
Apr2g2436 813 Hamap Protein SEY1 [SEY1]. 9 763 IPR008803 -
Apr2g2436 813 CDD GBP 36 242 - -
Apr2g2436 813 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Apr2g2436 813 MobiDBLite consensus disorder prediction 762 813 - -
Apr2g2436 813 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Apr2g2436 813 PANTHER PROTEIN SEY1 4 781 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2436 Apr-Chr2 28884147 28896246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2436 K22698 - gmx:100797516 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2436 2 28884147 28896246 Apr2g2436 2 28884147 28896246 PCT