Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2434 ATGGCGTCGATTGGTGCAGTCAAATTCTTGCTGTATTTGGTTCTTTGCCTCGTCAACTATCTACCTCTTTGTCAAGGGAATTTGATTGCAGGTAAGGAGAACTGGTATGAACGGTACCCATTTATCAGAAAAGCAAGTTCATTCTCATCTTCACCAAGCAGCATGAACAATGGGTATGATTACATAATAGTGGGAGGTGGCACTGCAGGGTGTCCATTGGGTGCAACCCTGTCTAAGAACATGAAAGTTTTGGTGCTAGAAAGAGGAGGAGTCCCTTTCAACAACCCCAATGTGTCCTTCTTAGGGAACTTTCACATTACCTTGGCGGATACTTCACCAACTTCAGCATCCCAATACTTCATTTCAACCGATGGAGTCCTCAATGCAAGGGGAAGAGTTTTAGGTGGTGGCAGTTCCATTAATGCTGGCTTCTACACTAGAGCAAACCCAAGATTTATAAGGAAGGTGGGGTGGGATCCGAAGCTGGTAAATGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGTCCAAAGTTTTCATCGTGGCAGAGAGCAGTTAGAGACGGCCTTCTAGATGCTGGTGTCTCTCCCTTTAATGGCTTCACATATGATCACAAGTATGGAACCAAAGTTGGTGGAACCATCTTTGACAGATTTGGCCGCCGCCACACTGCTGCTGAACTCCTTGCTTCTGGGAATCCTGATAAACTTACTGTTTTGATCTATGCCACTGTCCAAAAGATTGTTTTTGACACAACAGGAAAAAGACCAAGAGCTACGGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCAGTTCTGGGAAATGACAGGCAGAGTGAAGTGATTGTGTCTAGCGGGGCAATTGGAACTCCTCAATTGCTATTGCTCAGTGGAATTGGCCCAAAAGAAGAACTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCTAAGAGACCAGTTCAGCAGTCACTCATCGAAACTGTCGGTATTACCAATTTGGGTGTGTACATTGAGACTAGTAGTGGGTTTGGGCAGTCCAGGGATAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGGCAGCTCTCCACAATTCCACCTAAGCAAAGATCACAAGGAGCTGTTGAAGCTTATGTGAAGAGCAAGAGAGACATACCGGTAGAAGCATTCAGGGGAGGCTTCATCTTGTCAAAAGTTGCCAATCCTTGGTCAACAGGTGAGCTCAGGTTGATCAACACAAAAGTGGAGGACAACCCTGCTGTTACTTTCAACTACTTCAATCACCCTTATGATCTTAAGCGCTGTGTGGAGGGAATCCGGTTGGCTATGAAGGTTGTGCAGTCACAGCACATCACAAACTACACATTGAGTGATAGACAAACCACAGAGAAACTGCTTAACCTCAGTGTGAAGGCTAATGTCAACCTCATACCCAAACATGCCAATGACACAAAATCACTACAGCAGTTTTGTAGAGATTCTGTTATCACTATTTGGCACTACCATGGTGGGTGTCATGTGGGGAAGGTAGTTGATTCTGATTATAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGTTCAACCTTTACTGAGTCACCAGGAACCAATCCTCAAGCTACTGTCATGATGATGGGAAGGTACATGGGACTGAAGATTTTAAGGGATAGGTTCGGGAAATAG 1761 0.4497 MASIGAVKFLLYLVLCLVNYLPLCQGNLIAGKENWYERYPFIRKASSFSSSPSSMNNGYDYIIVGGGTAGCPLGATLSKNMKVLVLERGGVPFNNPNVSFLGNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRANPRFIRKVGWDPKLVNESYPWVEKQIVHRPKFSSWQRAVRDGLLDAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASGNPDKLTVLIYATVQKIVFDTTGKRPRATGVIFKDENGKQHEAVLGNDRQSEVIVSSGAIGTPQLLLLSGIGPKEELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSSGFGQSRDSIHCHHGILSAEIGQLSTIPPKQRSQGAVEAYVKSKRDIPVEAFRGGFILSKVANPWSTGELRLINTKVEDNPAVTFNYFNHPYDLKRCVEGIRLAMKVVQSQHITNYTLSDRQTTEKLLNLSVKANVNLIPKHANDTKSLQQFCRDSVITIWHYHGGCHVGKVVDSDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRFGK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2434 586 PIRSF Alcohol_oxidase 41 586 IPR012132 GO:0050660
Apr2g2434 586 PANTHER OSJNBA0019K04.7 PROTEIN 2 586 - -
Apr2g2434 586 SUPERFAMILY FAD/NAD(P)-binding domain 51 582 IPR036188 -
Apr2g2434 586 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
Apr2g2434 586 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Apr2g2434 586 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Apr2g2434 586 Gene3D - 59 572 IPR036188 -
Apr2g2434 586 Gene3D - 176 522 - -
Apr2g2434 586 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Apr2g2434 586 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2434 Apr-Chr2 28870878 28876548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2434 39 583 Miscellaneous Gene Families AT5G51950 50.909 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2434 K15403 - gmx:100784433 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2434 2 28870878 28876548 Apr2g2434 2 28870878 28876548 PCT