Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2427 ATGGCCATCTCTCCAATTTTGTTGTTTGCTATCTTCTCTCTCATTTATGGCAATGGCGTTCTTCCCATTGAAGCTACCCACCATGTTTATAGAAATCTTGAGAGTCTGTCTTCTGATTCCTCCAATCAACCTTATAGAACTGGTTATCACTTTCAACCTCCCAAGAATTGGATTAATGGACCAATGAGGTACAAAGGACTTTACCATTTGTTTTATCAATACAATCCAAAAGGTGCTGTTTGGGGCAATATTGTTTGGGCCCACTCTGTATCAAAGGATCTAGTGAATTGGACCCCACTAGATCCTGCCATCTATCCTTCTCAACCGTCTGATATCAAGGGGTGTTGGTCAGGCTCAGCCACTATGCTTCCTGGGGGCAAGCCAGCCATTTTATATACAGGAATTAACCCCAACAATCATCAAGTTCAAAACCTAGCCATCCCCAAAAACATGTCTGACCCATTACTTAGGGAGTGGATTAAGTCACCCAAAAATCCATTAATGGCACCAACTACAGGTAACAAAATAAATTCAAGCTCATTTAGAGACCCTACCACTGCTTGGTTAGGCAAAGATGGGTATTGGAGGGTGTTGATTGGAAGCAAAGTAAATACTAGAGGAATGGCAATTTTGTATAAGAGTAAAAACTTTGTTAATTGGGTTCAAGCTAAACAACCACTACATTCAGCTGAAGGCACTGGAATGTGGGAGTGTCCAGATTTCTATCCAGTTCTAGATAAGAGCCCATTAACCATTGGTCTTGACACGTCTATGAATGGTGATAATGTTAGACATGTACTCAAGGTTAGCTTGGATGATACAAAACATGATCATTATTTGATTGGGTCTTATGACACTTCCAAGGATGTCTTCATTCCGGATAACGGATTTGAAGATGACCAATCCATTTTGAGATATGATTACGGAAAATATTATGCCTCAAAAACAATTTTTGATGATGGAAAGAACAGAAGGGTCTTATTGGGTTGGGTTAACGAATCCTCAAGTGTTGCGGACGATATCAAGAAAGGATGGTCTGGAATCCATACTATTCCAAGGGCCATCTGGCTTCATAAATCGGGAAAACAGTTGGTGCAATGGCCGGTGGTGGAAATTGAAAGCCTGCGTGTGAACCCTGTTGTCAACTGGCCCACCAAAGTGGTCAAAGGTGGTGAACTGCATCAAGTTGCTGGTGTTACTGCAGCACAGGCTGATGTTGAAATTTCATTTGAAGTGAAAGAGTTTGGAGAGGCTGAAATATTGGACCATTGGGTAGATCCCCAAGTTCTGTGTGGTAGAAAAGGTGCAGCCGTTAAAGGTGGTTTGGGACCTTTTGGTCTGCTAGTTTTTGCTTCTCAAGGCTTGAAAGAGTACACGGCAGTGTTCTTTAGAATATTTAGATACCAGCATAAAAATTTGGTTCTCATGTGTAGCGATCAAAGCAGGTCTTCTTTGAATAAAGATAACGATATGACCACTTATGGGACTTTTGTGGATGTGGACCCTCTTCATGAGAACCTGTCGTTAAGAAGTTTGATTGATCACTCAGTAGTTGAGAGTTTCGGGGGAGAAGGAAAGGCATGCATCACAGCTAGAGTATATCCCACATTAGCAATCAATGATAAGGCACAACTATATGCTTTCAATAATGGAACTGCTGCTGTCAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGA 1716 0.4138 MAISPILLFAIFSLIYGNGVLPIEATHHVYRNLESLSSDSSNQPYRTGYHFQPPKNWINGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIYPSQPSDIKGCWSGSATMLPGGKPAILYTGINPNNHQVQNLAIPKNMSDPLLREWIKSPKNPLMAPTTGNKINSSSFRDPTTAWLGKDGYWRVLIGSKVNTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFYPVLDKSPLTIGLDTSMNGDNVRHVLKVSLDDTKHDHYLIGSYDTSKDVFIPDNGFEDDQSILRYDYGKYYASKTIFDDGKNRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVVEIESLRVNPVVNWPTKVVKGGELHQVAGVTAAQADVEISFEVKEFGEAEILDHWVDPQVLCGRKGAAVKGGLGPFGLLVFASQGLKEYTAVFFRIFRYQHKNLVLMCSDQSRSSLNKDNDMTTYGTFVDVDPLHENLSLRSLIDHSVVESFGGEGKACITARVYPTLAINDKAQLYAFNNGTAAVKITRLSAWSMKKAKIN* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2427 571 Gene3D - 380 565 - -
Apr2g2427 571 CDD GH32_Fruct1-like 56 357 - -
Apr2g2427 571 Gene3D Glycosyl hydrolase domain; family 43 54 379 IPR023296 -
Apr2g2427 571 Pfam Glycosyl hydrolases family 32 C terminal 371 564 IPR013189 -
Apr2g2427 571 SUPERFAMILY Arabinanase/levansucrase/invertase 41 369 IPR023296 -
Apr2g2427 571 SUPERFAMILY Concanavalin A-like lectins/glucanases 368 567 IPR013320 -
Apr2g2427 571 SMART glyco_32 50 525 IPR001362 GO:0004553|GO:0005975
Apr2g2427 571 PANTHER CELL-WALL INVERTASE 2 571 - -
Apr2g2427 571 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 368 IPR013148 -
Apr2g2427 571 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2427 Apr-Chr2 28821206 28824697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2427 62 571 Glycoside Hydrolase AT3G13790 63.250 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2427 K01193 - gmx:100776791 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2427 2 28821206 28824697 Apr2g2427 2 28821206 28824697 PCT